Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01447 ATGAAGAAGCTCATAAGTGGCCAGCGTGTTCAAGTCCCCATTTATGACTTCAAGAAGCACCAACGCTCTTCTGATAGTTTTCGTCAGGTCAATGCCTCGGATGTCATTATCTTGGAGGGAATTCTTGTATTACATGATCAAGGTGTCAGGGATCTGATGAACATGAAAATCTTTGTTGACACAGATGCTGATGTGCGGCTTGCTCGTAGAATTAGACGTGACACAGTGGAGAGGGGCAGGGATATAAACTCCGTTCTTGAACAGTATGCAAAGTTGTTAAGCCTGCATTTGATGATTTTGTTCTACCATCAAAGAAATCGACTTATTTGCCTGGTTGTTGAGCATGGTCTTGGTCATCTGCCTTTCACTGAAAAGCAAGTAGTTACTCCAACAGGATCTGTCTATACTGGTGTTGATTTCTGCAAGAAATTGTATGGTGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAAAATGCACTTCATGCATGTTGTAAAGGCATTAAAATTGGAAAAATTCTTATTCACCGGGATGGAGATAATGGAAAACAACTTATATATGAGAAGCTTTCTAAGGATACATCAGAACGACATGTCTTGCTTCTCGATCCTGTCCTTGCTACAGGTAACTCGGCCAACCAAGATGCAGCGTTAGCAATGGGTCGAGGAGCTGCAACAAAGGAGCTAATGAGTCTTCCTCTCGCTGAGCTGGAAAGACGGTGCCGACACAATGGATTGTCACTTGTTGGTGGTAGAGAAATGATGGCTACTGTGCGGGTTGGAGTTTACAGAATGAGAATGGTTGGAGTGCTCTCCAAGAAGTAG 822 0.4319 MKKLISGQRVQVPIYDFKKHQRSSDSFRQVNASDVIILEGILVLHDQGVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKLLSLHLMILFYHQRNRLICLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLYGVSIVRSGESMENALHACCKGIKIGKILIHRDGDNGKQLIYEKLSKDTSERHVLLLDPVLATGNSANQDAALAMGRGAATKELMSLPLAELERRCRHNGLSLVGGREMMATVRVGVYRMRMVGVLSKK* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01447 273 Gene3D - 1 103 IPR027417 -
Rops8g01447 273 Pfam Uracil phosphoribosyltransferase 105 222 - -
Rops8g01447 273 Pfam Phosphoribulokinase / Uridine kinase family 2 90 IPR006083 GO:0005524|GO:0016301
Rops8g01447 273 PANTHER URIDINE KINASE 2 181 - -
Rops8g01447 273 Gene3D - 104 231 IPR029057 -
Rops8g01447 273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 106 IPR027417 -
Rops8g01447 273 CDD PRTases_typeI 139 224 IPR000836 -
Rops8g01447 273 SUPERFAMILY PRTase-like 99 231 IPR029057 -
Rops8g01447 273 PRINTS Uridine kinase signature 64 74 - -
Rops8g01447 273 PRINTS Uridine kinase signature 78 89 - -
Rops8g01447 273 PRINTS Uridine kinase signature 7 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01447 Rops-Chr8 32194719 32195749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01447 2 93 PRT Gene Family AT5G40870 83.696 1.89e-45 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01447 K00876 - smo:SELMODRAFT_440038 294.664