Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01444 ATGAGTGGGTTTCGTATGGAAGTGATAGTTGTGTGCTGTGTTTTGGTTGTGCTTGGAGGGTTACCCCTCTCCTCAGATGCACAGCAAAATAACTCGTTTTACAGAGATTCATGTCCCAACGTGCATGCAGGAGGTTTGGATGTGGTGAGCCAGATCAAGGCAGTGGTGGAGGATGCTTGTCATAACACAGTTTCTTGTGCTGATATTCTTCCACTTGCTGCTGAGATACCTTCGGTTCTGGCTCATGGTCCTGACTGGAGAGTTCCGTTGGGAAGAAGGGGTGGTGTCCTTACCTTTTGGCACGGCATATGGTGCAGTTTGCCAATGCGGTGGTGTATAGGCTTGGCATATAGCACGTGA 360 0.4917 MSGFRMEVIVVCCVLVVLGGLPLSSDAQQNNSFYRDSCPNVHAGGLDVVSQIKAVVEDACHNTVSCADILPLAAEIPSVLAHGPDWRVPLGRRGGVLTFWHGIWCSLPMRWCIGLAYST* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01444 119 PANTHER PEROXIDASE 72-RELATED 36 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g01444 119 PRINTS Haem peroxidase superfamily signature 64 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops8g01444 119 PRINTS Haem peroxidase superfamily signature 82 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops8g01444 119 Gene3D - 11 107 - -
Rops8g01444 119 ProSiteProfiles Plant heme peroxidase family profile. 12 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops8g01444 119 Pfam Peroxidase 36 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops8g01444 119 SUPERFAMILY Heme-dependent peroxidases 27 108 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops8g01444 119 PRINTS Plant peroxidase signature 82 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g01444 119 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops8g01444 119 PRINTS Plant peroxidase signature 63 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01444 Rops-Chr8 32104575 32105048 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01444 35 108 Peroxidase AT3G32980 49.333 1.07e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01444 K00430 - gmx:112997600 82.0333