Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01440 ATGACTGGGAAAATCCACCACCACTATCTCTTTTTGTTTTCATTGTTGTCCCTCTTTTACTCCGTCCACCCGAAACTTGATCTCCACCCTTCAGACTTGAAGGCTTTCTTAACACTCCACAAGGACCTCGGAGTCAACAGTACCAACGCCACCGTCAACCCGTGTGATGCCGAGGGCATGTTCTGTGAGAAGAGGCTTTCCAACAACGAAATCTACATCCTCAGAATCACGAGGTTGGTGTTCAAAAACAAGAACCTCAATGGAGTGTTGTCCTCTGCCATAGGACGCCTCACAGAGCTTAAAGAACTCTCTCTTTCTAACAACCACCTCGTTGACTCAATCCCACCCCTGATAGCTGACTGCAGAAAGCTTGAGATTTTGGACCTCTCAAACAACCTCTTCTCTCGCCATGTTCCTTATGAACTATCCTCGCTTATTCACCTTCGTGTCCTTGATGTGTCTTCCAACAAACTCTCAGGAAACTTGAATTTCCTCATGTATTTTCCAAACCTGGAGACTCTCTCTGTGGCAGACAACCTATTCACTGGGAGAGTGCCAGCCTCCATAGATTCCTTTCGCAATCTCAGGCACTTCAACATTTCTGGGAACCTTTTTCTCGAAGGTTCTTCTCTCCCACTGAACGAAAGGTTTGAATATGAATATGAATATGAACACTCTGCATCAGATACCGTCCCCAAACGCTACATCTTTGCTGAGAGTTCAAATGAAAGAAGGAACGGTTCTCCTGCACCTGCCCCATCATCCAGCAATGAAAATTCCAGTGTTGCTGCAGCTCCTGGTCTAGCAGTTCACCACAGGCACATGAAAATAGCTAGGTGGATTCTTGGGTTTGGGGCTGGGGTACTGGCTGGGACTATTTCTCAGTTCATATTTTGCTTGCTGTTCAAGTTGGCTTTGACTTTGATCAAGGGAAGAGGAAAAGGTTTAGGCACTACAATTTTTAGTTCCTTGATTAAGAATGCCGAGGACTTGGCTTTCTTGGAGAAAGAAGAAGGGTTGGCTTCTTTGGAAATCATTGGAAGCGGTGGGTGTGGAGAAGTTTACAAGGCTGAATTACCAGGAAGCAATGGCAAAATGATTGCCATCAAGAAGATTATTCTGCCTCCCAAGTATGCAGCTGACTTAACTGTACAAGACAGTAAGCTTCTTCATGTAAAGATGCGCCAAATTAAATCGGAGATTAACACGGTTGGTCAAATTCGACATAGGAACCTTCTGCCTCTGCTGGCTCACGTGCCTAGGCCTGATTGCCATTACCTTGTCTATGAATTCATGAAGAATGGAAGTTTAGAGGAAGTGTTGAAGAAAGTCGAAAGAGGTGAAAGGGAGTTGGATTGGTTGTCAAGGCACAAGATTGCACTTGGTGTTGCAGCTGGCCTTGAATACCTTCAAATGAGTCACAGTCCACGTATAATCCATAGAGATCTCAAGCCAGCAAATATTCTTCTTGATGATGATATGGAACCTCGCATAACAGATTTTGGGCTTGCGGAAGCAATGCCAGATGCTCAAACACACATCTCACTTTCAAATATAGCTGGCACTTTGGGATATATAGCACCAGAGTATTTACAGGCACCCATCTTTTCTGAAAAGTGTGATATATACAGCTTTGGAGTTATTCTTGGTATCTTGGTGATAGGCAAGCTACCTTCGGATGGGTTCTTTTGGCATAATGATACGACTTTGGTGTGGTGGATGAGAACGGTGATGACTTCAGAAAATCCCAAGGAAGCAATTGATGCAAAGCTTATGGGTAATGGATACGAGGAACAAATGCTTCTGGTTTTGAAGATTGCCTGCTTTTGCACATTGGATGATCCGAAGGAGAGGCCTAACAGTAAGGACGTAAGGTGTATGTTGTCCCAAATTAAGCATTGA 1902 0.4427 MTGKIHHHYLFLFSLLSLFYSVHPKLDLHPSDLKAFLTLHKDLGVNSTNATVNPCDAEGMFCEKRLSNNEIYILRITRLVFKNKNLNGVLSSAIGRLTELKELSLSNNHLVDSIPPLIADCRKLEILDLSNNLFSRHVPYELSSLIHLRVLDVSSNKLSGNLNFLMYFPNLETLSVADNLFTGRVPASIDSFRNLRHFNISGNLFLEGSSLPLNERFEYEYEYEHSASDTVPKRYIFAESSNERRNGSPAPAPSSSNENSSVAAAPGLAVHHRHMKIARWILGFGAGVLAGTISQFIFCLLFKLALTLIKGRGKGLGTTIFSSLIKNAEDLAFLEKEEGLASLEIIGSGGCGEVYKAELPGSNGKMIAIKKIILPPKYAADLTVQDSKLLHVKMRQIKSEINTVGQIRHRNLLPLLAHVPRPDCHYLVYEFMKNGSLEEVLKKVERGERELDWLSRHKIALGVAAGLEYLQMSHSPRIIHRDLKPANILLDDDMEPRITDFGLAEAMPDAQTHISLSNIAGTLGYIAPEYLQAPIFSEKCDIYSFGVILGILVIGKLPSDGFFWHNDTTLVWWMRTVMTSENPKEAIDAKLMGNGYEEQMLLVLKIACFCTLDDPKERPNSKDVRCMLSQIKH* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01440 633 Gene3D Transferase(Phosphotransferase) domain 1 432 633 - -
Rops8g01440 633 Gene3D Ribonuclease Inhibitor 32 165 IPR032675 -
Rops8g01440 633 Gene3D Ribonuclease Inhibitor 166 218 IPR032675 -
Rops8g01440 633 SUPERFAMILY L domain-like 47 207 - -
Rops8g01440 633 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 70 162 - -
Rops8g01440 633 Pfam Protein kinase domain 343 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01440 633 ProSiteProfiles Protein kinase domain profile. 340 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01440 633 SMART serkin_6 340 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01440 633 FunFam Leucine-rich repeat receptor-like protein kinase 432 633 - -
Rops8g01440 633 Gene3D Phosphorylase Kinase; domain 1 331 431 - -
Rops8g01440 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Rops8g01440 633 SUPERFAMILY Protein kinase-like (PK-like) 336 628 IPR011009 -
Rops8g01440 633 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 65 632 - -
Rops8g01440 633 Pfam Leucine rich repeat 99 158 IPR001611 GO:0005515
Rops8g01440 633 ProSiteProfiles Leucine-rich repeat profile. 99 121 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01440 Rops-Chr8 32048263 32050164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01440 13 633 Receptor kinase-like Gene Family AT2G31880 59.434 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Rops8g01440 Pkinase 2.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01440 - - gmx:100811980 830.861