Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops8g01438 | ATGATGAAGACTCTGAAGCGTAGCACTCATTCCGCGATCACGCAGCACAATCTGTACAAGTTACCATTGGGAGCTCAGGCAACGGGGAAGCAATATGCATGCAAGACAATAGCCAAGAGGAAGCTTGCAAGCAAGGAGGACATAGAGGATGTTAGGAGGGAGGTCCAAATCATGCACCACCGCTCAGGACAGGCTAATATTGTGGAACTCATGGGTGCCTATAAGGATAAGCAATCTGTTCATTTGGTTATGGAGTTGTGTGCAGGTTGTGAGCTCTTTGATCGTATCATTGCCAAGGGTCATCCATGCATACAGAGGGGGTGTGCTTCCAAGTTTGTTGTGCCCATTGTGGATGAGGTAAGTGGTATTGGAAGAAGAATGGTTGTGTTTGAGCTTTCTCATGGTGTTGATAAAAACATGGCAGCACCCATGGTTGGTGATCACGTTGAGCAATCACGTGGGAGCAAATGA | 471 | 0.4713 | MMKTLKRSTHSAITQHNLYKLPLGAQATGKQYACKTIAKRKLASKEDIEDVRREVQIMHHRSGQANIVELMGAYKDKQSVHLVMELCAGCELFDRIIAKGHPCIQRGCASKFVVPIVDEVSGIGRRMVVFELSHGVDKNMAAPMVGDHVEQSRGSK* | 157 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops8g01438 | 156 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 25 | 120 | - | - | |
Rops8g01438 | 156 | ProSiteProfiles | Protein kinase domain profile. | 1 | 156 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops8g01438 | 156 | Gene3D | Phosphorylase Kinase; domain 1 | 23 | 95 | - | - | |
Rops8g01438 | 156 | Pfam | Protein kinase domain | 26 | 116 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops8g01438 | 156 | SUPERFAMILY | Protein kinase-like (PK-like) | 27 | 104 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops8g01438 | Rops-Chr8 | 32003023 | 32011235 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops8g01438 | 26 | 110 | EF-hand Containing Proteins | AT5G12180 | 78.824 | 1.05e-38 | 135 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Rops8g01438 | Pkinase | 7.9e-14 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops8g01438 | K13412 | - | vvi:100251670 | 137.117 |