Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01438 ATGATGAAGACTCTGAAGCGTAGCACTCATTCCGCGATCACGCAGCACAATCTGTACAAGTTACCATTGGGAGCTCAGGCAACGGGGAAGCAATATGCATGCAAGACAATAGCCAAGAGGAAGCTTGCAAGCAAGGAGGACATAGAGGATGTTAGGAGGGAGGTCCAAATCATGCACCACCGCTCAGGACAGGCTAATATTGTGGAACTCATGGGTGCCTATAAGGATAAGCAATCTGTTCATTTGGTTATGGAGTTGTGTGCAGGTTGTGAGCTCTTTGATCGTATCATTGCCAAGGGTCATCCATGCATACAGAGGGGGTGTGCTTCCAAGTTTGTTGTGCCCATTGTGGATGAGGTAAGTGGTATTGGAAGAAGAATGGTTGTGTTTGAGCTTTCTCATGGTGTTGATAAAAACATGGCAGCACCCATGGTTGGTGATCACGTTGAGCAATCACGTGGGAGCAAATGA 471 0.4713 MMKTLKRSTHSAITQHNLYKLPLGAQATGKQYACKTIAKRKLASKEDIEDVRREVQIMHHRSGQANIVELMGAYKDKQSVHLVMELCAGCELFDRIIAKGHPCIQRGCASKFVVPIVDEVSGIGRRMVVFELSHGVDKNMAAPMVGDHVEQSRGSK* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01438 156 PANTHER SERINE/THREONINE-PROTEIN KINASE 25 120 - -
Rops8g01438 156 ProSiteProfiles Protein kinase domain profile. 1 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01438 156 Gene3D Phosphorylase Kinase; domain 1 23 95 - -
Rops8g01438 156 Pfam Protein kinase domain 26 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01438 156 SUPERFAMILY Protein kinase-like (PK-like) 27 104 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01438 Rops-Chr8 32003023 32011235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01438 26 110 EF-hand Containing Proteins AT5G12180 78.824 1.05e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Rops8g01438 Pkinase 7.9e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01438 K13412 - vvi:100251670 137.117