Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01427 ATGATGGTGAAGGAGAAAGGTGGTTATGATGTTGTTTGTAAGAACAAGTTGTGGGATTCGGTGGGGGAAGAATATGGCTTAGGTGTGAAGGATGGTTCTTCTGTGAAACTGGTTTACAATAAGTACTTGAGTGCACTAGAGACATGGCCGAAGAATATTGCTGACAGTGAGTTCTCTGAGTGTGATGTATTATATGATAGAGTTAAATTTGGCCAGTGTTTGATGGAGGTGCAATCTGAATTCTTGTTGGATGATTATGGTGAGGAAGAGGTGGAGGATGAACTCAAGGTACTCATTGGTGCAAGATTGGCATTGCAAAAGGGAGAGCCAATTCCAACTCCAACAAGTAACGTGGTACAGTGGCCTCGACAAGGGAACAAGAGCCTCTCGGTAAGCAAGAAGGGTGACGCCAAGTTTGAGAAAAAAAACACCATGCCTGGTCGCTTTTGTTTCCTCGGGGAACTGAGCAAAGGATGGGTTTTGGTTGGTAACAAAGTGAATAAAAGGGAAGCTTGA 516 0.438 MMVKEKGGYDVVCKNKLWDSVGEEYGLGVKDGSSVKLVYNKYLSALETWPKNIADSEFSECDVLYDRVKFGQCLMEVQSEFLLDDYGEEEVEDELKVLIGARLALQKGEPIPTPTSNVVQWPRQGNKSLSVSKKGDAKFEKKNTMPGRFCFLGELSKGWVLVGNKVNKREA* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01427 171 ProSiteProfiles ARID domain profile. 1 51 IPR001606 GO:0003677
Rops8g01427 171 SUPERFAMILY ARID-like 2 54 IPR036431 GO:0003677
Rops8g01427 171 CDD ARID 3 47 - -
Rops8g01427 171 Gene3D - 1 60 IPR036431 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01427 Rops-Chr8 31729855 31731466 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Rops8g01427 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01427 - - tpra:123892530 138.272