Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01384 ATGCCTTATCATCAAACACCGGTCCCTCCATTCCTTCATGTTGTTGATGCCAAAGATGGTCAGCCTCCGGTGCAAGGGGATCCAGGTGCCTATGTCGTTAATTTTTCTAGTGGAAGACCAAATATCCAAGAGCAAGGCAACCATCTAAATCATGCTTGGCATCATCAAAGGCCTTTTCCTTCCAGAGGAAACATTTCAATGCAACATGGTATGGGCCCGAGGCCCTTTATGAGACCTCCTTGCTATGGTCCACCTCCAGGGAACATGGTTGGTCCAAGCTACCCAGGACCTGCACCTGTATGGTGTGTGCCGAGGCCACCACCTGGCTCCATTAGGGACCCCACCATCGGAACTGGGTTTCATATCCTGTCAAACCAACACCTCAGCCACACCTCCCACATTGCTGTCGAGTTTGCTGGGTTCGTGACCAAGGTTGACAGGCATTCTGGTAAGGAGCTTGAGAAGGTGCCCAAGTTTTCGAAGAAAGGTGCTGCAGTTTACGTTGGCAAATAA 513 0.5049 MPYHQTPVPPFLHVVDAKDGQPPVQGDPGAYVVNFSSGRPNIQEQGNHLNHAWHHQRPFPSRGNISMQHGMGPRPFMRPPCYGPPPGNMVGPSYPGPAPVWCVPRPPPGSIRDPTIGTGFHILSNQHLSHTSHIAVEFAGFVTKVDRHSGKELEKVPKFSKKGAAVYVGK* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01384 170 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 128 168 IPR009001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01384 Rops-Chr8 30484608 30485120 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01384 130 165 Eukaryotic Initiation Factors Gene Family AT1G07930 66.667 2.60e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01384 K18757 - gmx:100813202 182.185