Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01371 ATGTTCATTTCTTCTTCACATGTTCCTCGTTGGCTTCAAGTCCTCCTCACTGAGAAGTTCTACAACGCTTGCATAATTCATGAAGAGGCAAAGAAGAATGAGAAAAACGTGTATTGTTTGGATTGTTGCATAAGTCTTTGCCCTCACTGTGTGTCCCCTCATCGCTCTCACAGACTCTTACAGATTAGAAGATATGTATATCATGATGTTATCAGGTTGGATGAAGCTTCAAGGTTAATTGACTGCACTTTTGTTCAATCCTACACAACCAACAGTGCAAAAGTGGTATTTTTAAACCAAAGGCCACAGACAAGGAACTTCAGAGGCTCCGGCAATTTCTGCAGCACCTGTGACAGAAGTCTGCAAGACCCATACCAGTTCTGCTCTCTCTCTTGCAAGGTCAATCACCTCATCAGAACAACGGGTTCTCTCTCCGGTCACCTTTTCGAGTGCAACTACTTGCCGTTACCGGAATCTGGCATCGACGACGGTTCAATGACCCCTGACTCAGTTCTTGAACCGACCGGTTCGGCTCGTACCTCGTCAGGTTCGGCTGGTTATGGTGGGGTGGATTGTAGGACCACTCTTGCTTGCACTGCCACCACTGAGGTTGTGAGGAAGAAGAGGACCGGCGGTGGCTCCAATTTCCGACCACCGTGCCGACCGGCGTGCTCGCCGGTGTCGGAAATCACGGTTGGTCTTATGAATCGGAGGAAAGGGACACCGCAGAGGGCCCCACTATATTGA 747 0.49 MFISSSHVPRWLQVLLTEKFYNACIIHEEAKKNEKNVYCLDCCISLCPHCVSPHRSHRLLQIRRYVYHDVIRLDEASRLIDCTFVQSYTTNSAKVVFLNQRPQTRNFRGSGNFCSTCDRSLQDPYQFCSLSCKVNHLIRTTGSLSGHLFECNYLPLPESGIDDGSMTPDSVLEPTGSARTSSGSAGYGGVDCRTTLACTATTEVVRKKRTGGGSNFRPPCRPACSPVSEITVGLMNRRKGTPQRAPLY* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01371 248 Pfam PLATZ transcription factor 63 134 IPR006734 -
Rops8g01371 248 ProSiteProfiles Zinc finger B-box type profile. 19 62 IPR000315 GO:0008270
Rops8g01371 248 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01371 Rops-Chr8 30006026 30008225 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Rops8g01371 PLATZ 3.3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01371 - - pvu:PHAVU_008G142900g 464.536