Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01368 ATGTTGTCATTTCTGTACTTGCTTCTAGCTCTTCCTGTGTTGGCATTGATCCTCTTCAAGAAATACAGAACCATTAAGAACCCATCAACCCATCTACAAGGTCCAAGAAGCCTTCCCATCATTGGCAACCTTCATCAACTTGATAGTTCAAATCTCCATTTGCAACTATGGAAGTTCTCAAAGATCTATGGTCCCCTTTTCTCCTTGCAAATTGGCTTCAAGAAAGCCATAGTTATTTCCACACCTAAACTTGCCCGAGAGATCCTCAAAGACCATGATCATGACGTATCCAGCAGACCCCCCTCACTTGGCCCACAAAAATTGTCTTACAATGGGTTAGAGATGATATTTTCCCCATACAGTGATTACTGGAGAGAAATCAGAAAAACTTGTGTGGTCCATTTCTTCAGCTCCAAAAAGCTTGCTAGCTTTTCTCATGTAAAAAACTCTGAGGTCAAGCTATTGATCAAAAAGATATCTGGGCATGTTAGTTCTTCCAAAATCACAAACTTGAGTGAGATCATAATGTCTACCTCAAGCTCAATTATTTGTAGGATTGCTTTTGGGAGAAAATATGAGGAGGAAGGAGCGGAAAAAACAAGGGTCCATGAGCTTCTTAATGAGATACAAGCCATGTTCCTTGCCTTCTTTGTTTCAGATTATATTCCTTTCTTCGGGTGGATTGATAAACTCTCAGGGCTAATTTCTCGTCTTGAAAACACTTTCAAGGCTTCTGATGTGTTCTTACAGGAAGTTCTTAATGACCACCTTGATCCTAATAGGCAGAAAGAAACAGAAGAGGAGGATATGGTTGATGTGTTACTTGAGCTTAAGAAGCAGGGTAATTTGTCAATAGATCTCACCCATGATCACATCAAAGCTGTCCTAATGAACCTACTTGTAGCGGCAACCGATACAAGTGCAGCCACATCAGTTTGGTTAATGACTGGGTTGATGAAGAATCCAAGAGCAATGAAGAAAGCTCAAGAAGAAGTTAGAAATCTCTATGGCAACAAAGAGTTCATAGATGAAGATGATGTTCAAAAGCTTACATATCTGAAAGCAGTGATAAAAGAGACCCTGAGATTTTATTCACCAGCACCACTAGTCCCAAGAGAAACCAACAAAAGTTTCATTTTAGATGGGTATGAAATACAGCCCAAGACAATAGTGTATGTGAATGTTTGGGCCATTCATAGGGACCCTGAGGCTTGGAAAGACCCAGAAAAGTTTTATCCTGAGAGATTCTTGAACAATGAGATAGATTTTAAGGGACGAGATTTTGAGCTGATTCCATTTGGTGCTGGACGTAGAATTTGCCCAGGTATACCATTGGGAGTTTCAAGTGTGGAACTCATGACTGCAAACCTTCTTAATTCATTTGATTGGGAAATGCCTCCAGGGATGACACCAGAAGGCATAGACACTGAAGGGTTGCCAGGACTTGCCAGTCACAAGAAGAATCATCTTTGCCTTGTTGCCAAGAAGCATGTGTGA 1497 0.4068 MLSFLYLLLALPVLALILFKKYRTIKNPSTHLQGPRSLPIIGNLHQLDSSNLHLQLWKFSKIYGPLFSLQIGFKKAIVISTPKLAREILKDHDHDVSSRPPSLGPQKLSYNGLEMIFSPYSDYWREIRKTCVVHFFSSKKLASFSHVKNSEVKLLIKKISGHVSSSKITNLSEIIMSTSSSIICRIAFGRKYEEEGAEKTRVHELLNEIQAMFLAFFVSDYIPFFGWIDKLSGLISRLENTFKASDVFLQEVLNDHLDPNRQKETEEEDMVDVLLELKKQGNLSIDLTHDHIKAVLMNLLVAATDTSAATSVWLMTGLMKNPRAMKKAQEEVRNLYGNKEFIDEDDVQKLTYLKAVIKETLRFYSPAPLVPRETNKSFILDGYEIQPKTIVYVNVWAIHRDPEAWKDPEKFYPERFLNNEIDFKGRDFELIPFGAGRRICPGIPLGVSSVELMTANLLNSFDWEMPPGMTPEGIDTEGLPGLASHKKNHLCLVAKKHV* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01368 498 Pfam Cytochrome P450 33 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01368 498 Gene3D Cytochrome P450 26 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01368 498 SUPERFAMILY Cytochrome P450 34 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01368 498 Coils Coil 325 345 - -
Rops8g01368 498 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01368 498 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01368 498 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01368 498 CDD CYP71-like 63 490 - -
Rops8g01368 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Rops8g01368 498 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01368 498 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01368 498 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01368 498 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01368 498 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01368 498 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01368 498 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01368 498 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01368 498 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01368 498 PANTHER CYTOCHROME P450 71B11-RELATED 26 495 - -
Rops8g01368 498 FunFam Cytochrome P450 83B1 18 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01368 Rops-Chr8 29927863 29930246 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01368 5 498 Cytochrome P450 AT4G31500 45.382 1.44e-157 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01368 - - gmx:100806470 717.613