Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01362 ATGGAATCACTTGTTCTTCTAGCTTTTCCTCTCTTGCTATTGTTCTTCTTCCTAAAACACAAAACATCTAAGAAGTCAACCCTTCCACCAGGCCCTAGAGGCCTTCCCTTCATTGGCAACCTCCACCAACTTGATAGTTCAAAACTTTGTTTGGACCTCTATGAACTCTCCAAGAAATATGGCCCTTTCTTTTCCCTTCAACTAGGTTCAAGACAAGCCATTGTTGTTTCCTCACCAAAAATGGCCAAGGAGGTGTTGAAAACTCATGACCTTGAGTTTTGTAACCGACCAAACTTGATTAGCCATATGAAATTTTCATATAATGGGCTTGACATGGCATTTTCTCCATATAGAGATTATTGGAGACACACTAGAAAACTTTCCATCATCCATTTCCTTAGCCTCAAACGTGTCTTAATGTTTTCCTCAATAAGAAAATATGAGGTCACCCAAATGATCAAGAAGATTTCAGAACATGCTTCTAGTTCCAAAGTTACCAACTTGCATGAGTTAGTGACATGTCTCACAAGCACCATAGTTTGTAGGACCGCGTTTGGTAGAAGGTTTGAAGAGGAAGGAGTAGAACGTAGCATGTTCCATGATTTGCTTAAAGAAGGGCAAGAGTTGATTGTTTACTTCTATTGCACTGATTATTTTCCCTTTTTGGGGGGTTTTATTGATAAACTCACTGGAATAATGGGTCGTCTTGAGAGATTGTTCAAGGTGTTTGATGGGTTTTTTCAGAATATTATTGATGAACACCTTGATCCAGAAAGGAAAAAACTTTCAGATGAAGAGGATATGATTGATGCCTTGATTCAATTAAAGAATGATCGTTCTTTCTCATTGGATCTCACTCCCGAACACATCAAACCTTTGATCATGAATATACTTTTGGCGGGTATAGATACAAGTGCAGCCGCAGTAGTTTGGGCTATGACTGCCGTAATGAAGGACCCCAGAGTAATGCAGAAAGCTCAAGCAGAGATCAGAAATTTGTTTGAAGGGAAAGGTTTTATAGAAGAAGATGATATCCAAAAGCTTCCTTATCTTAAGGCAATTATAAAAGAAACAATGAGATTGTACCCAACGGTGCCCCTACTTTTACACAGAGAAACAAGGAAAAAATGTAACATTGAAGGGTATGAAATTCCAGAGAAGACATTGGTGTATGTGAATGCTTGGGCAGTCCATAGAGACGCTGAAACATATAAGGACCCAGAAGAGTTTTACCCTGAGAGATTCCTAGACAGTACTATAGATTTTAGGGGACAAGATTTTGAGCTGATTCCGTTTGGCACTGGCAGAAGAATTTGCCCTGGAATACATATGGGAGTTTCTACAGTGGAGCTTGTACTTGCTAATCTTCTCTATTCATTTGATTGGGAAATGCCTCAAGGGATGAAAAGGGAAGAGATAGACTTTGACGTGCTTCCAGGAGTTGTCCAACACAAGAAACATCCTCTCTACCTTGTTGCAAAGAACCCAATGTGA 1494 0.3956 MESLVLLAFPLLLLFFFLKHKTSKKSTLPPGPRGLPFIGNLHQLDSSKLCLDLYELSKKYGPFFSLQLGSRQAIVVSSPKMAKEVLKTHDLEFCNRPNLISHMKFSYNGLDMAFSPYRDYWRHTRKLSIIHFLSLKRVLMFSSIRKYEVTQMIKKISEHASSSKVTNLHELVTCLTSTIVCRTAFGRRFEEEGVERSMFHDLLKEGQELIVYFYCTDYFPFLGGFIDKLTGIMGRLERLFKVFDGFFQNIIDEHLDPERKKLSDEEDMIDALIQLKNDRSFSLDLTPEHIKPLIMNILLAGIDTSAAAVVWAMTAVMKDPRVMQKAQAEIRNLFEGKGFIEEDDIQKLPYLKAIIKETMRLYPTVPLLLHRETRKKCNIEGYEIPEKTLVYVNAWAVHRDAETYKDPEEFYPERFLDSTIDFRGQDFELIPFGTGRRICPGIHMGVSTVELVLANLLYSFDWEMPQGMKREEIDFDVLPGVVQHKKHPLYLVAKNPM* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01362 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Rops8g01362 497 Gene3D Cytochrome P450 21 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01362 497 CDD CYP71-like 59 489 - -
Rops8g01362 497 SUPERFAMILY Cytochrome P450 29 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01362 497 Pfam Cytochrome P450 29 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01362 497 FunFam Cytochrome P450 83B1 16 492 - -
Rops8g01362 497 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01362 497 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01362 497 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01362 497 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01362 497 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01362 497 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01362 497 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01362 497 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01362 497 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01362 497 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01362 497 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01362 497 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01362 497 PANTHER CYTOCHROME P450 71B11-RELATED 13 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01362 Rops-Chr8 29767878 29770010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01362 4 492 Cytochrome P450 AT4G31500 46.341 2.36e-165 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01362 - - gmx:100803017 799.275