Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01360 ATGGCCAAGATTCGTGGATTCAAGCTCGGGAATCGCCTGATTCGGGTCTCTAGATGGATCTTCCGTAAAATCCGGATTCGGATCCGACCCGGATACCATCGACTTGGTGGTGGTCCACCCCAGTCCCTGGTAAGGAAGCCCATCACGAAACTCATCAAGTGGGGCCGCAAGCTGACGTCAGGAGCCAAGTCCCTCTTGAAAGTGAATCTCGGGTCGGGTTATGCCCGATTAGGATCCGACCCGGATTTGAAGGTGCCAAAAGGGTACTTGGCAGTTTATGTGGGGCAGAAGGACGGTGAGTTACACCGTGTTCTGGTGCCGGTAATTTACTTCAACCACCCCTTGTTTGGAGAGTTGCTAAGAGAGGCCGAGAAGGAATATGGGTTTCACCAACAAGGAGGAATCACTATCCCATGTCGGGTCACGGAGTTTGAACGGGTCAAGACCCGTATTGCATCTGGATCCTGA 468 0.5278 MAKIRGFKLGNRLIRVSRWIFRKIRIRIRPGYHRLGGGPPQSLVRKPITKLIKWGRKLTSGAKSLLKVNLGSGYARLGSDPDLKVPKGYLAVYVGQKDGELHRVLVPVIYFNHPLFGELLREAEKEYGFHQQGGITIPCRVTEFERVKTRIASGS* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01360 155 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 66 146 IPR003676 GO:0009733
Rops8g01360 155 Pfam Auxin responsive protein 79 148 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01360 Rops-Chr8 29658317 29658784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01360 80 144 Calmodulin-binding Proteins AT3G43120 52.308 1.24e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01360 K14488 - gmx:100783436 222.246