Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01331 ATGTTCCGTCGAGCAACGACCCTTCTCGCCGCCAGATCGCGGTGGTTCTCCACGGCGGCAGATTCAAGCTTCGTGGAAACGTGGAAGAAGGTGAGCCCCAACATGGACCCACCCAAGACACCTCTGTCATTCATGCAACCTCGCCCACCTACACCATCTTCGCTCCCTTCAAAGCTCACTGTCAACTTCGTCCTCCCTTACGCTTCTCAACTCTCCGCCAAAGAGGTTGACATGGTCATAGTACCAGCAACAACTGGGCAGATGGGTGTTCTCCCTGGACATGTAGCAACAATTGCAGAGTTGAAACCTGGAGTCCTATCTGTACACGAGGGGAATGAAGTGAGCAAGTTTTTTATCGGCAGTGGCTTTGCTTTCATCCATGCAAACTCTGTTGCTGATATAATAGCTGTTGAGGCCGTACCAGTTGATCAAATTGATGCAAGCTTAGTCCAAAAGGGTCTTCAAGATTTCACTCAGAAGCTGAGCTCGGCCTCAACTGATTTGGAGAAAGCTGAAGCCCAGATTGGGGTTGATGTCCATAGTGCTCTCAACTCAGCTCTTTCTGGATGA 570 0.5018 MFRRATTLLAARSRWFSTAADSSFVETWKKVSPNMDPPKTPLSFMQPRPPTPSSLPSKLTVNFVLPYASQLSAKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNEVSKFFIGSGFAFIHANSVADIIAVEAVPVDQIDASLVQKGLQDFTQKLSSASTDLEKAEAQIGVDVHSALNSALSG* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01331 189 Gene3D - 53 146 IPR036771 -
Rops8g01331 189 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 59 131 IPR020546 GO:0015986
Rops8g01331 189 FunFam ATP synthase delta 48 145 - -
Rops8g01331 189 CDD F1-ATPase_delta 59 182 IPR001469 GO:0015986|GO:0045261|GO:0046933
Rops8g01331 189 Hamap ATP synthase epsilon chain [atpC]. 57 177 IPR001469 GO:0015986|GO:0045261|GO:0046933
Rops8g01331 189 Gene3D - 147 188 - -
Rops8g01331 189 NCBIfam ATP synthase F1 subunit epsilon 64 174 IPR001469 GO:0015986|GO:0045261|GO:0046933
Rops8g01331 189 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 59 140 IPR036771 -
Rops8g01331 189 Coils Coil 154 174 - -
Rops8g01331 189 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 22 188 IPR001469 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01331 Rops-Chr8 29058246 29060806 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01331 1 189 Primary Pumps ATPases AT5G47030 69.458 3.76e-101 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01331 K02134 - tcc:18614544 299.671