Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01315 ATGTTCTTGTCAAATATTGACCTGTCCCTTGTTGTTTACCAAGACTCTGCCTCCTTTTTTGATCCTCCAAACAGCCAAATGAGCTTCTCTGCGATTTGTAGCAAATTTTACAATGCACTTAGCAAAATGCTTGTGCATTATGACTTTATGGCTGGCCGTCTAGTGCCAAGTTTGGAGGAGAATCATCGGTTTGAAATAGATTGTAATGATGCTGGTGTTGTGGTTGCTGCTGCAAGGACTGATAAAAAATTGAGTGAATTTGGTATGATTTTTGCACCTAATCCAGAGTTAAGGGAGTTAGTTGTTTTCTTAGATGAAGAGGATGAAGAAGAAACTGACCTGAAAGAAAAGCCCCTTGTCTTCTTACAGCTGACACAATTTGGATGTGGAAGTTTAGCATTTGCTTCTCACTACAACCATTGCATACTAGATGGCATTGCAGTGAGAGACTTTGAGGTGAATATGGCTGCTTTGACACGTGGTGATGACCTCATCATAGTACCTAATGCAGACAGGACATTACTGAGAGCTCGAAACCCTCCAAAGATAAGTCATCCACATTTTGAGTATTCGAAGTCTACTGGCATAGAGAACTTGTTTACTGTTCGTGGCACAAGTGGCACCAATTTTAGACAATCCCTTGCAGAAAACCAAATTCATGTGATTTATTTATCACCACAACAAATTAGCAGCTTCAAAAAGAAAGCATTAAAGAACAGCAATTTGAAGAACACCACCACTTTTCAAGTTGTTGCTGCAAAAATATGGAAGGCAAGAAGTATTGCAACAAAGATGGCAGAGGATAAAATATCCTCAATGTTGTTTCCAGTGGATGTTAGGAAAAGGATTGTCCCTGAACTTCCAGATGGCTTTGCAGGTAATGCATTGGTTCCTGGCTTTGCAAGAGCAACTGTGAGGGAGCTTATGGAATTAGAAGATGCTTGTCATATAAGGAAAGTGCAAGAAGGGATTGAAAGATTGGATGATGAGTACATTAAGTCAGGTATAGATTGGTTAGAGGTGAATGGAGGAGTGCCTTGCAGGGATGATAGTTTCTCCTTGGTGGCATGGTGGAGATTGGGGTTAGCGGAGCAACGTTTTGCATGGGGTAGACTAAAATGTGCCACTCCACTTACAGTTAAGCCTGGATTGGTCATGCTGTTGCCAGGGCCACAGGATGAAGGGGGTCTCAATATATGCCTGAATCTACCTGAGGATCAAATGCAAGAGTTTTGTAGAATAATCCTAGAGATTTAG 1257 0.4121 MFLSNIDLSLVVYQDSASFFDPPNSQMSFSAICSKFYNALSKMLVHYDFMAGRLVPSLEENHRFEIDCNDAGVVVAAARTDKKLSEFGMIFAPNPELRELVVFLDEEDEEETDLKEKPLVFLQLTQFGCGSLAFASHYNHCILDGIAVRDFEVNMAALTRGDDLIIVPNADRTLLRARNPPKISHPHFEYSKSTGIENLFTVRGTSGTNFRQSLAENQIHVIYLSPQQISSFKKKALKNSNLKNTTTFQVVAAKIWKARSIATKMAEDKISSMLFPVDVRKRIVPELPDGFAGNALVPGFARATVRELMELEDACHIRKVQEGIERLDDEYIKSGIDWLEVNGGVPCRDDSFSLVAWWRLGLAEQRFAWGRLKCATPLTVKPGLVMLLPGPQDEGGLNICLNLPEDQMQEFCRIILEI* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01315 418 Gene3D - 1 192 IPR023213 -
Rops8g01315 418 Pfam Transferase family 1 411 - -
Rops8g01315 418 Gene3D - 210 417 IPR023213 -
Rops8g01315 418 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01315 Rops-Chr8 28759340 28760947 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01315 4 418 Monolignol Biosynthesis Gene Families AT5G48930 28.706 2.79e-55 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01315 K15400 - gmx:100801822 669.077