Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01311 ATGGCAAGAAGTTACTGTTACAAGGATTTGCTTCCTTTTGGGGCTATGGTGACCATGGAATGTGTCAACGTGGCCTTGAATACTCTGTTCAAAGCAGCTACCTTGAGAGGGATGAGTTACCATGTCTTTGTTGTTTATGCTTATGCTATTGCTGCTATTGTACTCCTTCCTGCACCCTTTTTCTCCAGAAGATCAAGAGTGCTTCCTCCTCTCAATTTCCCCATACTAAGCAAAATTGGTCTTCTTGGGCTGATAGGATGTTCATCTCAGATCATGGGTTACACAGGCATCAGTTTCAGTTCTCCCACTCTCTCTTCAGCGATCAGCAACTTGGTGCCAGCTTTTACCTTCTTGCTTGCCATCATTTTCAGGATGGAAAAGGTGGCTATAAGAAGTTCAAGTAGTCAAGCCAAGGTCTTGGGTACCATAGTATCAATATCAGGAGCATTTGTAGTGACTCTCTACAAAGGACCACCAATCTTCATTGCTCATAGACCTTCCTTATCACTTCATCAACCTATTAACACTCTCAAATCAATGGATCAAAATTGGGCCATTGGTGGCCTTCTATTAACAGCAGAGTATATACTGGTTCCATTATGGTACATTGTACAGGTACAAATCATGAAGGTGTACCCTGATGAACTAACTGTGGTCTTCTTTTACAACTTATGTGTAAGCATCCTGGCTGCAATTGTAGGAGTGATTACTGAGACAAATGCAAGTGCTTGGAAAATAGGACTAGATACAGCATTGGCTTCCATAGTTTGCTCTGGAATTTTTGGATCATTTTTGAACAATGCAGTTCACACATGGGTACTACGTATAAAGGGGCCAGTCTATGTGGCAATGTTCAAGCCACTCTCAATTGCTATAGCTGTTGCCATGGGAGCCATGTTCCTTGGTGACGCTCTCCACCTTGGTAGTCTTCTAGGAGCCACAATAATAGCAATTGGATTTTATACTGTAATGTGGGGTAAAGCAACAGAAGAGGTGGGTGATGTCCCTGACCAGGAATCACCAACTACAGAGAATGTTCCTCTCTTGCAAAGCTATAAAACTGATAAAGCTGAAAAGAAAATGCATGGAAGTGTATAA 1098 0.4208 MARSYCYKDLLPFGAMVTMECVNVALNTLFKAATLRGMSYHVFVVYAYAIAAIVLLPAPFFSRRSRVLPPLNFPILSKIGLLGLIGCSSQIMGYTGISFSSPTLSSAISNLVPAFTFLLAIIFRMEKVAIRSSSSQAKVLGTIVSISGAFVVTLYKGPPIFIAHRPSLSLHQPINTLKSMDQNWAIGGLLLTAEYILVPLWYIVQVQIMKVYPDELTVVFFYNLCVSILAAIVGVITETNASAWKIGLDTALASIVCSGIFGSFLNNAVHTWVLRIKGPVYVAMFKPLSIAIAVAMGAMFLGDALHLGSLLGATIIAIGFYTVMWGKATEEVGDVPDQESPTTENVPLLQSYKTDKAEKKMHGSV* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01311 365 PANTHER WAT1-RELATED PROTEIN 9 339 IPR030184 GO:0016020|GO:0022857
Rops8g01311 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 327 - -
Rops8g01311 365 Pfam EamA-like transporter family 24 153 IPR000620 GO:0016020
Rops8g01311 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01311 Rops-Chr8 28679967 28684737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01311 1 356 Nodulin-like Gene Family AT3G28050 59.730 5.14e-150 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01311 - - gmx:100814137 600.897