Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01296 ATGGATCTGGAGTCTGTGATTCACAGAAACCCAATTAAGGATGAATCATGGAAGACAGTGTTAACTTTAGCATATCAGAGCTTAGGAGTTGTTTATGGAGATTTGAGCACATCCCCACTTTATGTTTTTAAAAGCACTTTTGATGAGGACATTGAACATTCAGAGACTAATGAAGAAATATATGGGGTCTTGTCTTTTGTGTTCTGGACACTTACACTTATTCCACTCCTCAAGTACGTGTTCATTGTGCTTAGAGCAGATGACAATGGTGAAGGAGGAACTTTTGCTCTGTATTCACTGCTATGCCGTCATGCCCAGGTAGGATTGTTGCCTAATATTCAGCTAGCAGATGAGGAATTAACTGAGTACACTAAAGATGGAACAGTGCCAATAGATAAGAAAAATGTTGGGTTGGTGTTGAAATCGGTGTTGGAGAAGCATAGGGTGTTGCAGAGGGTACTGCTTGTTCTGGCTTTGATAGGGACTTGCATGGTTATTGGGGATGGTGTGCTCACACCTGCAATTTCTGTTTTCTCTGCTGTGTCAGGCTTGGAGCTTTCCATGTCTAAAGAGCAGCACCGATACGTTGAAGTCCCAGTTGCTTGTGTAGTGCTGGTATTTTTGTTTGCGCTTCAACATTATGGGACCCATCGTGTGGGATTTTTATTTGCACCTGTTGTGATGACCTGGCTGCTGTGCATCAGTGCTATTGGTGTGTATAATATCCTCCATTGGAACCCACATGTTTATGAAGCTCTCTCTCCATTATACATGTTCAAATTTCTAAAGAAGACTCAAAGGGGAGGTTGGATGTCCTTGGGAGGGATTCTACTGTGTATAACGGGTTCTGAAGCTATGTTTGCTGATCTAGGACACTTTTCACAGTTGTCAATTAAGATTGCTTTTACATTTTTGGTGTACCCTTCTTTAATCCTGGCATATATGGGACAAGCTGCGTATCTGTCCAAGCATCATACTATTGAAAGTGATTACCGAATTGGGTTCTATGTATCTGTACCTGAGAAAATTAGATGGCCTGTTCTTGCAATAGCCATACTTCAATCTGTGGTTGGAAGTCAAGCTATTATCACAGGGACTTTCTCAATAATCAAACAATGTTCTGCCTTGGGATGCTTCCCAAAAGTTAAGATCATTCATACATCATCAAAGGTACATGGCCAGATTTATATTCCCGAGATCAACTGGTGTTTGATGCTACTTTGCCTGGCCATTACTGTCGGATTTAGAGATACAAGACGCATGGGAAATGCATCAGGCTTGGCTGTCATAACTGTCATGCTGGTGACCACTTGCTTAATGTCTCTGGTTATAGTCTTATGCTGGCATAGAAGTGTTTTCCTAGCCATAGGCTTTATATTCTTCTTTGGCTCCATCGAAGCACTCTACTTCTCTGCTTCCCTCATCAAGTTCCTTGAAGGGGCTTGGGTTCCAATTGCCCTCTCGCTCATCTTTCTTATTGTCATGTGTGTGTGGCACTATGGCACACTTAAGAAGTATGAGTTTGATGTTCAAAACAAGGTTTCCATCAACTGGCTCCTTGGTTTGGGCCCCACTCTAGGAATTGTGAGGGTTAAGGGAATTGGCCTCATAAATACTGAGCTTGTATCTGGGATCCCAGCTATTTTCTCTCACTTTGTTACCAATCTGCCAGCTTTTCATCAGGTTTTAGTCTTCTTTTGCATCAAATCTGTCCCAGTGCCACATGTCAGACCTGAAGAAAGGTTCTTAGTAGGTAGAGTTGGCCCAAAGGAATATAGGCTTTATAGGTGCATAGCACGGTATGGCTATCGCGATGTCCAAAAGGGTGACTCTGAGTTTGAGAAAGATCTTATTTGTAGTATAGCAGAATTTATACGCTCAGATACTTCTGAAAATGGCGTAGGATATGAAAATTTTGAAGATGATACAAAGATGACAGTTGTTGGGACTTCAGCATCAAACTCAGAACATGTAAGGATGTTGGAAGATGATCAAGATACTTCTCAAATGGAAGATGCTTCAGAATTGAGGGAGATTAAGTCTCCGGACAAAGTGAAGAAGCGAGTGAGGTTTGTTGTGCCAGCCAGTCCACAGATTGATTTGGAAGCAAGGAAGGAGTTGCAAGAGCTAATGGAAGCAAGGGAGTCAGGAATGGCATTTATAATGGGCCACTCATATGTGAAAGCAAAAAGAGGTTCAAGCTGGATAAAGAAAGCTGTAATCAATTATGGGTATGATTTCTTAAGGAGAAACTCTAGAGCACCAATTTATGCTTTAAGTATCCCTCATGCATCTACCCTAGAGGTGGGAATGATCTATCTTGTTTGA 2328 0.4171 MDLESVIHRNPIKDESWKTVLTLAYQSLGVVYGDLSTSPLYVFKSTFDEDIEHSETNEEIYGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHAQVGLLPNIQLADEELTEYTKDGTVPIDKKNVGLVLKSVLEKHRVLQRVLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEQHRYVEVPVACVVLVFLFALQHYGTHRVGFLFAPVVMTWLLCISAIGVYNILHWNPHVYEALSPLYMFKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTFLVYPSLILAYMGQAAYLSKHHTIESDYRIGFYVSVPEKIRWPVLAIAILQSVVGSQAIITGTFSIIKQCSALGCFPKVKIIHTSSKVHGQIYIPEINWCLMLLCLAITVGFRDTRRMGNASGLAVITVMLVTTCLMSLVIVLCWHRSVFLAIGFIFFFGSIEALYFSASLIKFLEGAWVPIALSLIFLIVMCVWHYGTLKKYEFDVQNKVSINWLLGLGPTLGIVRVKGIGLINTELVSGIPAIFSHFVTNLPAFHQVLVFFCIKSVPVPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDVQKGDSEFEKDLICSIAEFIRSDTSENGVGYENFEDDTKMTVVGTSASNSEHVRMLEDDQDTSQMEDASELREIKSPDKVKKRVRFVVPASPQIDLEARKELQELMEARESGMAFIMGHSYVKAKRGSSWIKKAVINYGYDFLRRNSRAPIYALSIPHASTLEVGMIYLV* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01296 775 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 773 IPR003855 GO:0015079|GO:0016020|GO:0071805
Rops8g01296 775 Pfam K+ potassium transporter 25 605 IPR003855 GO:0015079|GO:0016020|GO:0071805
Rops8g01296 775 NCBIfam potassium uptake protein 23 773 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01296 Rops-Chr8 28497424 28504215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01296 1 775 Inorganic Solute Cotransporters AT5G14880 76.697 0.0 1221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01296 K03549 - gmx:100793387 1340.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01296 8 28497424 28504215 Rops8g01296 8 28497424 28504215 ECH