Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01285 ATGGCTACAATACCTACTCATGTCAAAGCTTGGATCTACTCCGAATATGGCAAAAGCGTTGATGTTCTCAAGTTTAATCACAGTGTCCCTTTACCTGAACTGAAGGAGGATCAGGTTCTCATCAAGGTCGCTGCTGCATCCCTTAATCCCATTGATTATAAGAGAATGAAGGGGTGGTTCAAGGACACAGACTCCCCTTTACCTACTGCTCCAGGTTATGATGTTGCTGGAGTGGTGGTTAAGGTGGGAAGTCAAGTGAAGAAATTCAAGGTTGGAGATGAAGTTTATGGTGATATCAATGTTAAAGCTTTGGAATGTCCAAAGGTCATTGGTTCTTTGGCAGAGTATACTACTGCAGAAGAGAAACTATTGGCTCACAAGCCTCAGAATCTGAGTTTTGCTGAGGCTGCTAGCCTTCCTTTAACAATTGAGACTGCTTATGAAGGCCTTGAGCGAACTGGGTTTTCTGCTGGGAAATCTATACTTGTGTTGGGAGGTGCCGGTGGAGTTGGAACCCATATTATTCAGCTTGCCAAGCATGTCTATGGTGCATCCAAGGTAGCAGCTACATCTAGCACTGGGAAACTGGAATTGTTGAGGAATTTGGGAGCTGACTTACCTATTGACTATACTAAGGAAAATTTTGAAGACCTGCCTGAAAAGTTTGATGTGGTATATGATACAGTAGATCAGACTGGCAGGGCTTTCAAGGCTTTGAAAGAAGGAGGGAAAGTTGTGACAATAGTACCACCAGGACTTGATCCAGTGATCCTTTTCAAGGCTTTGAAAGAAGGAGGGAAAGTTGAGACAGTAGTACCACCAGGACTTGATCCAGTGATGCTTTTCATTCGCTCTTCTGATGGGGCTGTCTTAGAGAAACTAGGACCCTACATAGAGAGTGGCAAGGTGAAGCCAATACTTGACCCCAAGAGCCCTTTTCCATTTTCTGAAGCTGTTGAAGCATTTTCCTATCTGGAAACAGGCAGAGCCACTGGAAAAGTACTGCAATGGCAGAACTCAATCATTTCCACCACCACAAGCATGGCTACAATACCTACTCATCAGAAAGCTTGGACCTACTCCGAATACGGCAAAAGTGTTGATGTTCTCAAGTTTGATCCCAGTGTTCCTTTACCTGAGTTGAAGGAGGATCAGGTGCTCATCAAGGTGGTTGCTGCATCTCTTAATCCCGTTGATTATAAGAGAATGGAGGCGTTGTTCAGGGACACAGACTCCTCTTTACCTACTGCTCCGGGGTATGATGTTGCTGGAGTGGTGGTTAAGGTGGGAAGTCAAGTGAAGAAATTTAAGGTTGGGGATGAAGTTTATGGTGATATCAATGAGAAAGCTTTTGAATATCCAAAGGTCATTGGTTCTTTGGCAGAGTATACTGCTGCAGAAGAGAAACTATTGGCTCACAAGCCTCAGAATCTGAGTTTTGTTGAGGCCGCTAGCCTTCCTTTGACAATTGAGACTGCTTATGAAGGCCTTGAGCGAGCTGGGTTTTCTGCTGGGAAATCTATACTTGTGTTGGGAGGTGCTGGAGGAGTTGGAATCCATGTCATTCAGGTATGA 1575 0.4451 MATIPTHVKAWIYSEYGKSVDVLKFNHSVPLPELKEDQVLIKVAAASLNPIDYKRMKGWFKDTDSPLPTAPGYDVAGVVVKVGSQVKKFKVGDEVYGDINVKALECPKVIGSLAEYTTAEEKLLAHKPQNLSFAEAASLPLTIETAYEGLERTGFSAGKSILVLGGAGGVGTHIIQLAKHVYGASKVAATSSTGKLELLRNLGADLPIDYTKENFEDLPEKFDVVYDTVDQTGRAFKALKEGGKVVTIVPPGLDPVILFKALKEGGKVETVVPPGLDPVMLFIRSSDGAVLEKLGPYIESGKVKPILDPKSPFPFSEAVEAFSYLETGRATGKVLQWQNSIISTTTSMATIPTHQKAWTYSEYGKSVDVLKFDPSVPLPELKEDQVLIKVVAASLNPVDYKRMEALFRDTDSSLPTAPGYDVAGVVVKVGSQVKKFKVGDEVYGDINEKAFEYPKVIGSLAEYTAAEEKLLAHKPQNLSFVEAASLPLTIETAYEGLERAGFSAGKSILVLGGAGGVGIHVIQV* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01285 524 SUPERFAMILY GroES-like 5 165 IPR011032 -
Rops8g01285 524 CDD MDR_like_2 9 334 - -
Rops8g01285 524 Gene3D - 150 287 - -
Rops8g01285 524 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 259 335 IPR044626 GO:0016628
Rops8g01285 524 SMART PKS_ER_names_mod 18 336 IPR020843 GO:0016491
Rops8g01285 524 SUPERFAMILY GroES-like 352 512 IPR011032 -
Rops8g01285 524 Gene3D - 15 334 - -
Rops8g01285 524 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 131 256 IPR036291 -
Rops8g01285 524 Gene3D - 336 506 - -
Rops8g01285 524 Pfam Alcohol dehydrogenase GroES-like domain 37 114 IPR013154 -
Rops8g01285 524 Pfam Alcohol dehydrogenase GroES-like domain 384 446 IPR013154 -
Rops8g01285 524 Pfam Zinc-binding dehydrogenase 202 334 - -
Rops8g01285 524 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 158 179 IPR002364 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01285 Rops-Chr8 28232882 28242052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01285 36 251 Monolignol Biosynthesis Gene Families AT4G37980 25.506 2.66e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01285 K18980 - gmx:100817947 499.59