Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops8g01268 | ATGAACTCCAGAAACATGTCAAATGTTAGCTACAACATGAAGAACCCATCATGGATTCTCTTCACCACAATTCTCCTTTCATCTTTGTCTAACTCACTCTCTGATCCAAGAATCTCAGAAGCTGAACTCAACTGTGGCACAGCCAAAGCCCCACTTAAAGCCAATTACATCCCAAGTTTCATCAAAGAAATGGAGAGCCTCTCTCAATTGGTGACAAACCACAACTGGGGAACTCACTCTGTCAACATCTCAGGATCCATTCCCATCTTTGGCTTTGCACAATGCTTCAATGACCTCTCTCATACTGATTGCCTTCTCTGCTATGCTGCAAGTCGCACCAAGCTCCCTCGTTGCCTCCCTTCTCTCTCTGCTCGCATCTACCTTGATGGATGCTTCCTTCGCTATGACAACTACAGCTTCTACTCAGAGAGCACTGACCCTTTGAGGGATACCCTTAACTGCACATCACAGCATGGTGTGGCTGTTGGTGAAGCTGAGAGGTTGGAGCTGGAGAAGAGTGTTGGCAGAGTGGTTGATGTTGTGGCTATGGATGCTGTTGCCAAGGGAGGTGGGTTTGCTGTGGGAGAAGTTGAGGGTGTTTATGCCTTGGCACAGTGTTGGAACACTGTTGTGAGTGATGGGTGCAGAGATTGCTTGAGGAAAGCTGGGAAGGAGGTAAGAGGGTGCTTGCCAAAGAAGGAAGGGAGGGCCTTGAATGCTGGGTGTTATTTGAGATATTCAACAGAGAAGTTCTACAATGAAGAAAGTGCAGCAGATGGTGGAGATGGGTCTTTTAGAAAAGGAGCTATAATAGCAGCAGTGTTAGCAGCAGCTGCAGTTATAATGCTTGGTCTCTCTGCCTCTTATGCAGCCTTCACAAAATTGTCAAAGATAAAGAAAGGAAACAATAATCCCGGTCAGATTTCCTCTTCCATAAGCAAATCTAGCTTGAATTACAAATACGAAACTCTTGAGAAGGCCACAGATTATTTCAGCTCTTCAAGAAAAATAGGCCAAGGTGGAGCTGGTTCAGTTTTCAAAGGTATTCTCCCAAATGGGAAAGTTGTTGCTGTTAAGAGATTGGTCTTCAATAACAGGCAATGGGTGGATGAGTTCTTTAATGAAGTTAATTTGATTAGCGGAATGGAACACAAGAACCTTGTCAAACTATTAGGTTGTAGCATTGAAGGCCCTGAGAGCCTTCTTGTGTATGAGTACTTACCCAAAAAGAGTTTAGATCAATTTATCTTTGAAAAGAACAGATCTCATATTCTAAACTGGAAGCAGCGGTTTAATATCATACTTGGAATAGCAGAAGGGCTCGCATATCTTCATGAAGGCTCTAAAATAAGAATCATCCATAGAGACATCAAAAGCAGCAATGTTCTTCTGGACGAGAATCTCACTCCTAAGATTGCTGATTTTGGCCTTGCCAGGTGTTTTGCTGCTGATAAGACACATTTGAGCACTGGAATTGCTGGAACACTAGGTTACATGGCTCCTGAGTACCTAATTAGAGGACAACTTACAGATAAAGCTGATGTCTATAGTTTTGGAGTACTTGTTCTGGAGGTTGTATGTGGCAGGAGGAATAATGTCTTCAGAGAGGACTCTGGCTCGCTTCTACAAACTGTTTGGAAACTTTGCCGATCAAACACATTGGTTGAGGCTGTTGATCCTTGCTTGGGAGATGATTTTCCAGCAACTGAAGCATCAAGGATGTTTAACATTGGATTGCTTTGCACACAAGCTTCTGCTTCCCTGAGGCCATCCATGACCCAAGTTGTTTACATGTTAAGTAATTCAAATGTGGATATTCCTACACCAAATCAACCCCCATTTTTGAACACTGGAATGCTAGACTCAGACAGCTCCATTAGGTCTTATAGCACAAACAGCTTTGTATCCAATGCCTTAAAGAAGATTGGAGTGTCCCACAGCTACTCAGAGTCCTCTAGTTCACACAACTCAGATGAGCCATCAACAAGTGAAGAACCAATTATCCAAGCTTGA | 2013 | 0.4332 | MNSRNMSNVSYNMKNPSWILFTTILLSSLSNSLSDPRISEAELNCGTAKAPLKANYIPSFIKEMESLSQLVTNHNWGTHSVNISGSIPIFGFAQCFNDLSHTDCLLCYAASRTKLPRCLPSLSARIYLDGCFLRYDNYSFYSESTDPLRDTLNCTSQHGVAVGEAERLELEKSVGRVVDVVAMDAVAKGGGFAVGEVEGVYALAQCWNTVVSDGCRDCLRKAGKEVRGCLPKKEGRALNAGCYLRYSTEKFYNEESAADGGDGSFRKGAIIAAVLAAAAVIMLGLSASYAAFTKLSKIKKGNNNPGQISSSISKSSLNYKYETLEKATDYFSSSRKIGQGGAGSVFKGILPNGKVVAVKRLVFNNRQWVDEFFNEVNLISGMEHKNLVKLLGCSIEGPESLLVYEYLPKKSLDQFIFEKNRSHILNWKQRFNIILGIAEGLAYLHEGSKIRIIHRDIKSSNVLLDENLTPKIADFGLARCFAADKTHLSTGIAGTLGYMAPEYLIRGQLTDKADVYSFGVLVLEVVCGRRNNVFREDSGSLLQTVWKLCRSNTLVEAVDPCLGDDFPATEASRMFNIGLLCTQASASLRPSMTQVVYMLSNSNVDIPTPNQPPFLNTGMLDSDSSIRSYSTNSFVSNALKKIGVSHSYSESSSSHNSDEPSTSEEPIIQA* | 671 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops8g01268 | 670 | Pfam | Protein kinase domain | 332 | 538 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops8g01268 | 670 | Gene3D | - | 40 | 140 | IPR038408 | - | |
Rops8g01268 | 670 | Gene3D | - | 164 | 251 | IPR038408 | - | |
Rops8g01268 | 670 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 38 | 140 | - | - | |
Rops8g01268 | 670 | CDD | STKc_IRAK | 337 | 599 | - | - | |
Rops8g01268 | 670 | Gene3D | Transferase(Phosphotransferase) domain 1 | 407 | 608 | - | - | |
Rops8g01268 | 670 | MobiDBLite | consensus disorder prediction | 647 | 670 | - | - | |
Rops8g01268 | 670 | Pfam | Salt stress response/antifungal | 192 | 248 | IPR002902 | - | |
Rops8g01268 | 670 | Pfam | Salt stress response/antifungal | 81 | 138 | IPR002902 | - | |
Rops8g01268 | 670 | ProSiteProfiles | Protein kinase domain profile. | 331 | 615 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops8g01268 | 670 | Gene3D | Phosphorylase Kinase; domain 1 | 291 | 406 | - | - | |
Rops8g01268 | 670 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 452 | 464 | IPR008271 | GO:0004672|GO:0006468 | |
Rops8g01268 | 670 | ProSiteProfiles | Gnk2-homologous domain profile. | 149 | 251 | IPR002902 | - | |
Rops8g01268 | 670 | SMART | serkin_6 | 331 | 599 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops8g01268 | 670 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 296 | 406 | - | - | |
Rops8g01268 | 670 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 407 | 607 | - | - | |
Rops8g01268 | 670 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 92 | 648 | - | - | |
Rops8g01268 | 670 | FunFam | Cysteine-rich receptor-like protein kinase 3 | 153 | 251 | - | - | |
Rops8g01268 | 670 | ProSiteProfiles | Gnk2-homologous domain profile. | 38 | 140 | IPR002902 | - | |
Rops8g01268 | 670 | SUPERFAMILY | Protein kinase-like (PK-like) | 314 | 630 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops8g01268 | Rops-Chr8 | 27770981 | 27775071 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops8g01268 | 19 | 496 | Receptor kinase-like Gene Family | AT5G40380 | 56.289 | 0.0 | 542 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Rops8g01268 | Pkinase | 1.2e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops8g01268 | - | - | gmx:100790404 | 1053.12 |