Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01265 ATGCAACAACCTCACCACCATGACGTCTCTACCAAACCATCTTCCGACGCCGATGATCACAAAACCACCAAGTTCAGGCCATTCTCGGCTTCGTCACAGGAAATGCTCACCTTCCACCTTTCATGGCTCAACCTCTTCTCATGCTTCTTCTCCACTTTCTCCATTCCTCCACTCCTCCCCATCATCCGCGACGACCTCAACCTCACCGCCGCCGACATAGGAGCCGCGGGTTCCGCCTCCTTCGCCGGCTCCATCATCTCCCGCCTCCTCATGGGCCCCACTTGCGACCTCGTGGGCCCACGCATAGCCTCTGGCTCACTCTCCCTCCTCACCGCACCCATCATCCTTGCCACCTCAATAGTCTCCTCTCCCCAATCCTTCATAGCCATCCGCTTCCTCGTCGGCATCTCTATTGGCAACTTCGTCTCTAACCAGTTCTGGATGAGTTCCATATTCCCCGCCGCAGTCGTCGGTGTGGCCAATGGCGTCTCCGCCGGTTGGGCAAACACCGGCTGCGGCGTGTCCCAGCTCCTCATGCCTCTCATCTACTCCCTCGTCACGTGCCTCTTCCACGTGTCACCCTCCATCGCTTGGAGGTTATCATTCATAGTTCCCGCGGTTTTTCAAGCAGTTACGGGTGTCTTGGTGTTAGCATTCGGCCATGATGTCCCTAAGAACAAAAAAGTGGTGGGCCCCAAGGAAAACACTGTTAGTGTCGTGTTTCGTGGTTTGGGGAATTACAGAGGGTGGATTCTGGCTTTGCTTTATGGGTTTTCCTTTGGAGTGGAGCTTACAACTGATAACATTATAGCGCAGTATTTCTATGACAGGTTTGGTGTGAATTTGCAAATTGCAGGGACTATTGCGGCGTGTTTTGGGATGGCGAATTTTTTTTCGAGACCAATGGGAGGGGTTGTTTCTGATCAAATGGGGAAAAGGTTTGGAGTGAGGGGAAGGTTGTGGGCTCTGTGGGTGGTGCAAACAGTGGCGGGTTTGCTGTGTGTGTTGCTTGGGCAAGTTGACTCGTTGTGGGGTTCTGTCCTTGTGATGTGCTGTTTCTCTGTGTTTGTTCAAGCTGCTTCTGGCCTCACGTTTGGCGTGGTCCCTTTCGTTTCCAAAAGATCACTAGGAGTTATATCAGGAATGACAGGGAGCGGTGGAGCGATAGGGGCTGTTGTGACTCAATGGCTGTTGTTCTCAGGCGACAACTTGTCCAAGCAAACAAGCATTTCCTTAATGGGCCTAATCACCATCTTCTGTACTCTATCAGTAACCTTGATCTACTTCCCTCAATGGGGAGGCATGTTTTGTGGTCCTTCCTCACATCATGATTCCCTCGAAGACATTTATAGCTTGCTGGAATAA 1365 0.5194 MQQPHHHDVSTKPSSDADDHKTTKFRPFSASSQEMLTFHLSWLNLFSCFFSTFSIPPLLPIIRDDLNLTAADIGAAGSASFAGSIISRLLMGPTCDLVGPRIASGSLSLLTAPIILATSIVSSPQSFIAIRFLVGISIGNFVSNQFWMSSIFPAAVVGVANGVSAGWANTGCGVSQLLMPLIYSLVTCLFHVSPSIAWRLSFIVPAVFQAVTGVLVLAFGHDVPKNKKVVGPKENTVSVVFRGLGNYRGWILALLYGFSFGVELTTDNIIAQYFYDRFGVNLQIAGTIAACFGMANFFSRPMGGVVSDQMGKRFGVRGRLWALWVVQTVAGLLCVLLGQVDSLWGSVLVMCCFSVFVQAASGLTFGVVPFVSKRSLGVISGMTGSGGAIGAVVTQWLLFSGDNLSKQTSISLMGLITIFCTLSVTLIYFPQWGGMFCGPSSHHDSLEDIYSLLE* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01265 454 ProSiteProfiles Major facilitator superfamily (MFS) profile. 37 432 IPR020846 GO:0022857
Rops8g01265 454 Gene3D MFS general substrate transporter like domains 233 433 IPR036259 -
Rops8g01265 454 FunFam Nitrate transporter 2.1 233 434 - -
Rops8g01265 454 Gene3D MFS general substrate transporter like domains 30 231 IPR036259 -
Rops8g01265 454 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 16 443 IPR044772 GO:0015112
Rops8g01265 454 CDD MFS_NRT2_like 38 426 IPR044772 GO:0015112
Rops8g01265 454 Pfam Major Facilitator Superfamily 42 391 IPR011701 GO:0022857|GO:0055085
Rops8g01265 454 SUPERFAMILY MFS general substrate transporter 18 428 IPR036259 -
Rops8g01265 454 FunFam Probable high-affinity nitrate transporter 2.4 30 226 - -
Rops8g01265 454 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01265 Rops-Chr8 27653935 27659583 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01265 3 439 Inorganic Solute Cotransporters AT5G14570 63.283 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01265 K02575 - cave:132180989 618.231