Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01244 ATGGAGTGGAGTGAAGGGTCTCATCCAGTTTGCATGAGCTTCTACTGTGGGCTGCCACGGTGGAGCTATGGTTCAACACGATGCATGCAGCAAGGTAGCTCTATGGAGTTGAGTGAAAGACCCTCCCATGCCTTACCCGACTCAAAGAAACCCGATCCAGGTAATGGTGGGGATGACGTTGATCAAGAGTGTCAGGTTCCAGCATTCAGAGAGTACGGTCTGAATGAACTTCGAAGGGCCACAAATGAGTTCAGCACTGATTACATTGTCTCTGAGAGTGGTGAGAAAGCTCCCAATGTGGTTTACAGAGGGAAGCTTGAGAACAATCGGTTAGTGGCTGTCAAGAGGTTCTCCAAACTGTCCTGGCCTGATGATCAACAGTTTATGGCAGAGGCAGCTGGAGTTGGGAAAGTGAGGCACAAGAGACTGGTGAATCTAATTGGTTGCTGTGCTGAAGGAGATGAAAGGCTCTTGGTAGCCGAGTGCATGCCAAATGATACTTTGTCCAAGCATCTCTTTCATTGGGACAAGCAACCATTACCATGGGAAATGCGTGTTAGAGTTGCATACCATGTTGCCTCTGCTGAAACGTGGAGTATGTATCCTCATGAAACTGAGATCCTAATTACTAAGAGTCAAATGATCCAGCTGAATTGTGCTACTTGTGGTTTTGTGTTTGATGTGGATATGAGAGACAAGCTGACTACATTCATCGTTAAGAACCCTCCAGAAACAAAGAAAGGATCCAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAGGAGAGGCTGAAGGAAGGTGAAGCTGCTGATGAGGAGCTGAAAAATTGA 828 0.4686 MEWSEGSHPVCMSFYCGLPRWSYGSTRCMQQGSSMELSERPSHALPDSKKPDPGNGGDDVDQECQVPAFREYGLNELRRATNEFSTDYIVSESGEKAPNVVYRGKLENNRLVAVKRFSKLSWPDDQQFMAEAAGVGKVRHKRLVNLIGCCAEGDERLLVAECMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVASAETWSMYPHETEILITKSQMIQLNCATCGFVFDVDMRDKLTTFIVKNPPETKKGSKDKKAMRRAEKERLKEGEAADEELKN* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01244 275 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 58 252 IPR045845 GO:0004672|GO:0009742
Rops8g01244 275 FunFam Eukaryotic translation initiation factor 5 201 241 - -
Rops8g01244 275 MobiDBLite consensus disorder prediction 32 62 - -
Rops8g01244 275 MobiDBLite consensus disorder prediction 241 275 - -
Rops8g01244 275 MobiDBLite consensus disorder prediction 244 275 - -
Rops8g01244 275 Pfam Protein tyrosine and serine/threonine kinase 100 195 IPR001245 GO:0004672|GO:0006468
Rops8g01244 275 SUPERFAMILY Protein kinase-like (PK-like) 95 195 IPR011009 -
Rops8g01244 275 MobiDBLite consensus disorder prediction 42 57 - -
Rops8g01244 275 Gene3D - 205 246 - -
Rops8g01244 275 Gene3D Phosphorylase Kinase; domain 1 58 162 - -
Rops8g01244 275 FunFam probable serine/threonine-protein kinase At4g35230 59 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01244 Rops-Chr8 27052107 27053457 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01244 204 272 Eukaryotic Initiation Factors Gene Family AT1G77840 78.261 3.74e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Rops8g01244 PK_Tyr_Ser-Thr 1.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01244 K14500 - gmx:100793576 308.145