Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01236 ATGGAGTTTGCAGTGGCTAAAGCTTTGAAACCAAGTTTAAGGAGGGAGTTTATTTTTCAGCAAACATTTTTTGGAGAGATTTTGTGGTTGAACGTGAACACCGTGGTTGGTGGTTTCTCAGTGGGTGACCTCCTTGACTTCTCTAACGATGATAAACAACAAGTATATCACGTAGAAAAAGATAGCTTATCATCTGTTTCGTCACTGTCACGAGATAGCAACTCCAGTTCCACCAACGTACTTCAGCCGAGAGCCTTGTCGAGGAGCAACCTTCATGGCTTGCATGGGGACATTGACTTGACAGCATTAGGTAGGGATCAAACTTCGAAGGATGCATGGACTCATCAGGTTCGTGACATGCTTGAGAAGGAGGAAACAGTGAAAATTTTAGTGTGTCAGAATGTTGCATGCAAAGCTACATGGAATCCAGAAGATTATTTTTGCAAGAGGTGTTCTTGTTGTATATGTCATTATTATGGTGATAACAAGGACCCAAGTTGGTGGTTGACCTGCGGCTCTGATAATCCCAATGAGGAGTCATGTGGAATGTCATGCCATTTGCAATGTGCTTTGAGTAATCAAAAGTCTGGCATTTTGTAG 600 0.4233 MEFAVAKALKPSLRREFIFQQTFFGEILWLNVNTVVGGFSVGDLLDFSNDDKQQVYHVEKDSLSSVSSLSRDSNSSSTNVLQPRALSRSNLHGLHGDIDLTALGRDQTSKDAWTHQVRDMLEKEETVKILVCQNVACKATWNPEDYFCKRCSCCICHYYGDNKDPSWWLTCGSDNPNEESCGMSCHLQCALSNQKSGIL* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01236 199 PANTHER VIN3-LIKE PROTEIN 2-RELATED 116 198 IPR044514 GO:0010048|GO:0040029
Rops8g01236 199 Pfam PHD - plant homeodomain finger protein 132 198 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01236 Rops-Chr8 26805692 26806430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01236 84 198 PHD Gene Family AT2G18880 42.424 2.09e-24 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01236 - - gmx:100785502 146.747