Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops8g01231 | ATGTCCCTTGAAGCTCAAGAACCCACCCACTCCAATGGTGGTGGTGACTCTTGCAACGACACCCATAGAGTACATATCAAAATGATTTCAGTGGCATCGTCATCATGGGAGCAAATAAAACTTTGCAGCTTGGAGTTACAAATTGGTCATGATTCTTTTACTGATGAATCTTTCTGCAAGGATTTGATAAAGCCATGCCTTGTGGACTTGGATATACCACAAGCTTACTACAATGGCCACGATTGTGACATGGTTGTTAAGCTTTCAAGAATGTTTCATGACTTGATGTTGCAGCGCCATGGATGTAATCATGAAGATTATATTTGTGTGTTTATCATTGTGTATCCGACTTGTTGTTTCTACAACTTGGTGAATTCCTCTTGCTACTTCCATGCTGAACAAATTCCATCAAGTGAGTTGATACAAAGAATGACTTGCGAGGGTGGTGAAACTTCTTTGCCTGCAGGGGCAAGTGCACTATTAAACGTTGAACCTAAAGAGGATGATAACTGTGTCATATGCTTGCAAGGGTTCTCTTCTGGTGATGCATTCACGTTACCTTGTTCCCATGTTTACCACTATGACTGTATTTTGGAATGGTTTGTGCAGAGTAGTACGTGCCCTTTGTGTCGCTTCTCATGCAGTCATACATTGTTACAATGA | 663 | 0.4118 | MSLEAQEPTHSNGGGDSCNDTHRVHIKMISVASSSWEQIKLCSLELQIGHDSFTDESFCKDLIKPCLVDLDIPQAYYNGHDCDMVVKLSRMFHDLMLQRHGCNHEDYICVFIIVYPTCCFYNLVNSSCYFHAEQIPSSELIQRMTCEGGETSLPAGASALLNVEPKEDDNCVICLQGFSSGDAFTLPCSHVYHYDCILEWFVQSSTCPLCRFSCSHTLLQ* | 221 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops8g01231 | 220 | ProSiteProfiles | Zinc finger RING-type profile. | 171 | 211 | IPR001841 | - | |
Rops8g01231 | 220 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 157 | 218 | IPR013083 | - | |
Rops8g01231 | 220 | PANTHER | RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING | 105 | 212 | - | - | |
Rops8g01231 | 220 | SMART | ringv_2 | 170 | 211 | IPR011016 | GO:0008270 | |
Rops8g01231 | 220 | Pfam | Ring finger domain | 169 | 211 | IPR001841 | - | |
Rops8g01231 | 220 | SMART | ring_2 | 171 | 210 | IPR001841 | - | |
Rops8g01231 | 220 | SUPERFAMILY | RING/U-box | 163 | 215 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops8g01231 | Rops-Chr8 | 26706829 | 26707491 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops8g01231 | 167 | 211 | C3H Transcription Factor Family | AT4G12190 | 46.939 | 3.79e-09 | 50.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops8g01231 | - | - | aprc:113862471 | 169.474 |