Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01204 ATGGCAAACCCAGAAGCAAAGCTCGAAACTTTCATGCAGTGGCTGCAGGCAAATGGGGTGGAGCTACGAGGTTGCAAGATCAAGTACTGTGATTCCAGAAAAGGGTTGGGCATATTTTCTGACAAAGATGTTTCTGATGGGGTTCTGTTGGTAGTTCCACTAGATTTAGCAATTACTCCTATGAGGGTGTTGCAAGATCCTCTTCTAGGACCAGCATGTAGAGCAATGTTTGAAGAAGGAGATGTAGATGACAGGTTCTTAATGATGCTGTTACTGACTGTGGAGCGTTTGCGTAAGGATTCTCTATGGAAGCCGTACCTTGATATGCTTGCAACCACTTTTGGAAATCCACTTTGGTTTAGTGATGATGAACTTCAAGAGCTAAGAGGAACAACATTATATCGTGCAACTGAATTGCAGAAGAAAAGCTTGCTGTCTTTGTATGAAACTAAAGTGAAGGATTTAGTGAAGAAACTTTTGACTCTTGATGGAGATTCGGAGACTGAGGTGTGCTTTGAAGATTTCCTTTGGGCAAATTCAGTATTTTGGAGCCGTGCTTTGAACATTCCATTGCCTCGTTCTTATGTATTTCCAGAAACGCAAGAAGTTCATGATAATTGCATTTCAGAAGCTCATGAAAAAAGAAGCCAGGTTAAAAAATCTGACAGTCAAACCAAGGAAATGACATCTAACACAGTGCAAGGAGACACTGTTTGGGTAGAGGGTCTTGTTCCTGGCATTGACTTTTGCAACCATGATCTGAAGCCAATAGCAACATGGGAAGTTGATGGAACTGGTTTAACAACAGGAGTTCCTTCCTCCATGTATCTTCTTTCTGCTGCTCAAAGTCCCTTGCAGATTGATCGAGAAATTTCCATTAGTTATGGCAAAAAGGGAAATGAGGAACTTCTATATCTGTATGGTTTTGTCATTGAAGATAACACGGATGACTATCTCATGGTCCACTATCCAGCAGAAGCAATTAATACTATTTCTTTTTCAGAGTCCAAAAGCCAGCTTCTTGAAGCGCAGAAGGCTGAAATGAGATGTCTTTTACCCAAAACTTTGCTAGATCAAGGATTTTTTCCATTAGGCACCCAAAACAGTGGAGAAAATAACAAGAGCAACCAAGTTTCCAACTATAGTTGGAGTGGTCAGCGCAAGATGCCATCGTATGCAAACAAGCTGGTTTTTCCTGAGAAATTTATGACTGCCTTGAGGACCATAGCCATGCAAGAAGATGAACTTTTCAAGGTTTCCTCAATGCTGGAAGAGCTTGTTGGACCTGAAGGGGAGAGACAACCATCAGATATAGATGTCCAATCTGCAATATGGGAGGTTTGCGGTGATTCTGGAGCTTTACAATTGCTTATTGATCTTCTTCGTGTGAAGTTGATGGATCTTGAAGAGTGTTCCGGAACAGAGGAAAGTGACCTTGATTTGCTCAAGAAGGCCCTTATTATTGATAGCCAGGAAGATAGCAAACAGTGCATGAGCAATTCAAGCACAATGGCAAATGGCTCAGAGGAATCAAAGTTGATGACTAGAAAAAAGTGGTCTGCCATAGTATATAGGCGAGGCCAAAAGCAGCTAACTCGATTGTTCTTGAAAGAAGCAGAACATGCTCTGCAGTTATCACTGGAAGAAGAGGTGACAGTTCCTTGA 1665 0.4162 MANPEAKLETFMQWLQANGVELRGCKIKYCDSRKGLGIFSDKDVSDGVLLVVPLDLAITPMRVLQDPLLGPACRAMFEEGDVDDRFLMMLLLTVERLRKDSLWKPYLDMLATTFGNPLWFSDDELQELRGTTLYRATELQKKSLLSLYETKVKDLVKKLLTLDGDSETEVCFEDFLWANSVFWSRALNIPLPRSYVFPETQEVHDNCISEAHEKRSQVKKSDSQTKEMTSNTVQGDTVWVEGLVPGIDFCNHDLKPIATWEVDGTGLTTGVPSSMYLLSAAQSPLQIDREISISYGKKGNEELLYLYGFVIEDNTDDYLMVHYPAEAINTISFSESKSQLLEAQKAEMRCLLPKTLLDQGFFPLGTQNSGENNKSNQVSNYSWSGQRKMPSYANKLVFPEKFMTALRTIAMQEDELFKVSSMLEELVGPEGERQPSDIDVQSAIWEVCGDSGALQLLIDLLRVKLMDLEECSGTEESDLDLLKKALIIDSQEDSKQCMSNSSTMANGSEESKLMTRKKWSAIVYRRGQKQLTRLFLKEAEHALQLSLEEEVTVP* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01204 554 Gene3D set domain protein methyltransferase, domain 1 5 310 - -
Rops8g01204 554 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 5 494 - -
Rops8g01204 554 Pfam SET domain 35 296 IPR001214 GO:0005515
Rops8g01204 554 CDD SET_LSMT 31 310 - -
Rops8g01204 554 SUPERFAMILY SET domain 7 314 IPR046341 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01204 7 223 NAC Transcription Factor Family AT3G56570 23.789 7.10e-06 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Rops8g01204 SET 6.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01204 - - gmx:100777394 939.102