Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01199 ATGAACATGGATATGGCTTGTAGCTTACCACAGTCAAGAATGTTACACGGAGGTGTGGGGACGAGTTACAGACACAGATCAGTAGGTCAAGTAGGTCATCAATTTGATTTTAGAGGGAGAGGTTTTGCTTGTGCATTTCTTGGCAACTCGAGAAGTGCTTCGAGACTGCGTTTTAGTGGGATGAACAAAGTTAACAGTGTTTCTGCTTGTTGGAATAATTCAAGAGTGGTTTCTGGTGGTGAGTTTAAAGTTTTGAATATGAAGAGAAGTATGTCTTGTAAGAATAAGAATCTTTTTATGGGGTCTAGAGGAATTTGGTCAAAGTGCCAGGGTAATGATTCTTTAGCTTATGTTAATGGCAATGGCCGCAATGTTGATCATGTGGAAGGTTCGGGTGAGGATGCAGGGATGGGAACTGTTTCTAGTGCTGAACTGGATGCACCTTTGGAAGAAAAAGAAGGGCAAGCTGAGATGGAAGAAGGAGGGAGAGAAATAGGAGTAGAGGAACAGAGTGTGGATGAACTGAAAGAACTATTGCAAAAGGCCTTGAAGGAGCTCGAAGTTGCACAAATAAATAGTACTATGTTTGAGGAAAAGGTTAGAAAAATATCAGAGACTGCCATATTTTTGCATGATGAAGCTGCACGTTCTTGGAATGATGTTAATTCTACCCTCGACACCATTCAAGAAGTTGCAAATGAGGAACATTTGGCCAAAGAAGCTGTCCAAAATGCAACAATGGCTCTTTCATTAGCTGAGGCAAGACTTCAAGTAGCCATAGAATCTTTGGACGCTGCAAAAGAAGTGCCTGATTCAGAAGAAGGTTCTAATGAGAGCAATGGTGATAAGGACATAAAGGAAGACGAGAAAGCACTTTTCATTGCTCAAGAAGATATCAAGGAGTGCCAGGCAAATTTAGCCAGTTGTGAGGCAGAGCTGAGGCGCTTGCAAAGTAAAAAGGAGGAGTTGCAGAAAGAAGTGAGCAAGTTGCAAGAAATTGCTGAAAAGGCACAGCTGAATGCAGTGAAAGCTGAGGAGGATGTTACAAACATAATGCTTTTAGCAGAGCAAGCTGTTGCCTTTGAACTTGAGGCTACACAACGTGTAAATGATGCAGAGATTGCCTTACAGCGAGCGGATAATTCTGTGTCTAATTTGAATGCCGATACCACAGAAACTATACAAGTTCAAGATGTCGAGCCTGTTCCTGAGGAGGAGAAAGTGGTTCAAGGTTTTTCTGGTGATGCCACTGTTGAAAGAGACACAGATTTGGCAATTGATGATGAATCTTTGCCTGCCAAGTTGTCACCTGAAACACTATCCGATAAAACCAGCCAAATTGCAGAAGAAATAACACCGTCTGATTATTTAAGTGATAATGAGAATGCTGTTCAAACAAAAAAGCAGGAAACACAGAAAGATTTGACTAGAGATAGTTCACCCTTTGCTCCCAAGGCTTTACTGATGAAGTCTTCTCGATTCTTTTCTGCATCGTTTTTCTCTTTTACTGAAGATGGGGCTGAGTTCACACCAGCATCAGTTTTCCAAGGCTTTGTGTCATCTGCACAGAAGCAGTTGCCTAAGCTGGTTCTTGGGTTATTGTTAATGGGAGCAGGGGTTGCCTTCTATGCCAATAGGGCAGAGAGGAATGCTCAACTGCTTCAACCGGCAGATGTTATTGTGACAAATGCTGAAGAAGTTTCCTCTAGTGCAAAGCCTCTGGTTAGAAAACTTCAGAAACTTCCCAAGAAAATTAAGAAAATCATTGCGTCGTTACCTCATCAAGAGGTGACTGAGGAAGAGGCCTCCCTTTTTGACATGCTCTGGTTGTTACTTGCAAGTGTTATATTTGTGCCAATATTTCAAAAACTCCCTGGAGGCAGTCCTGTTCTTGGCTACTTGGCTGCTGGTATCTTGATTGGGCCTTATGGTCTCTCCATCATCCGTCATGTTCATGGAACTAAAGCAATAGCTGAATTTGGAGTTGTTTTCCTTTTATTCAATATTGGCCTGGAGCTCTCTGTTGAAAGGCTTAGTTCAATGAAGAAATATGTTTTTGGATTAGGCTCTGCACAGGTTTTGGCAACTGCTGTAGTTGCTGGCTTGGTGGCTCATTATATTTGTGGGCTACCTGGCCCTGCTGCTATTGTTATTGGGAATGGCCTGGCGTTATCATCTACTGCTGTTGTTCTGCAGGTGTTGCAGGAGAGAGGTGAGAGCACATCACGGCATGGAAGAGCTACATTTTCTGTTTTACTTTTTCAGGATCTGGCTGTCGTGGTCTTGCTAATACTCATACCTCTTATTTCACCTAATTCTTCCAAAGGAGGGGTTGGTTTTCAGGCCATTGCTGAAGCTCTTGGACTGGCTGCTGTTAAGGCAGCAGTTGCCATCACTGCCATAATTGCAGGTGGACGATTGCTCCTTCGACCAATATACAGGCAGGTTGCAGAAAATCAAAATGCAGAAATATTCTCAGCCAATACACTTCTTGTTATTCTTGGGACTAGTCTTCTTACAGCCAGGGCAGGACTTTCCATGGCATTGGGAGCATTTTTGGCTGGTCTACTACTTGCAGAAACTGAATTTTCCTTACAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTTTTGGGACTCTTCTTTATGACGGTAGGAATGTCAATAGATCCAAAGCTTCTTGTTTCAAACTTCCCAGTCGTCACAGGGACACTGGGACTCTTAATATGCGGCAAGACCATCTTGGTTACTTTGATGGGTAAAATCTTTGGGATTTCCCTCATTTCTGCCATAAGAGTTGGTCTTCTTCTTGCTCCTGGTGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTAAATCAGGGCATAATGTCTTCCCAGCTGTCATCTTTGTTGTTTCTTGTTGTGGGCATTTCAATGGCAATCACACCATGGCTAGCTGCAGGAGGCCAGCTGATTGCTTCCCGTTTTGAGCAGCATGATGTTAGAAGTTTATTACCTGTAGAAAGTGAGACAGATGATCTGCAAGATCATATCATTATTTGTGGATTTGGACGAGTTGGCCAGATCATTGCACAACTTCTTTCTGAGCGACTTATTCCGTTTGTTGCACTAGATGTGAGAAGTGATAGAGTAGCAGTTGGGCGAGCCCTGGATCTCCCTGTGTACTTCGGAGATGCTGGTAGTCGAGAGGTCTTGCACAAGGTTGGAGCTGAAAGGGCATGTGCTGCAGCAATAACTCTAGATACGCCTGGAGCAAATTATAGAACAGTTTGGGCTCTGAGCAAGTACTTCCCAAATGTGAAGACTTTTGTTCGTGCCCATGACGTTGATCATGGATTGAATTTAGAAAAGGCTGGAGCTACTGCTGTTGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCTGTGCTTGCTCAGGCTAAACTCCCCACTTCAGAGATTGCAGCAACTATAAATGAATTCAGAAGCCGGCATCTGGCTGAGCTCACAGAGCTGTGTGAAGCAAGTGGGAGTTCTCTTGGTTATGGATTTAATAAAATTATGAGCAAACCCAAATCCCAGTCCCCAGATTCATTAGATGAGGCCCAAGTCTCTGAAGGGACATTGGCAATATGA 3627 0.434 MNMDMACSLPQSRMLHGGVGTSYRHRSVGQVGHQFDFRGRGFACAFLGNSRSASRLRFSGMNKVNSVSACWNNSRVVSGGEFKVLNMKRSMSCKNKNLFMGSRGIWSKCQGNDSLAYVNGNGRNVDHVEGSGEDAGMGTVSSAELDAPLEEKEGQAEMEEGGREIGVEEQSVDELKELLQKALKELEVAQINSTMFEEKVRKISETAIFLHDEAARSWNDVNSTLDTIQEVANEEHLAKEAVQNATMALSLAEARLQVAIESLDAAKEVPDSEEGSNESNGDKDIKEDEKALFIAQEDIKECQANLASCEAELRRLQSKKEELQKEVSKLQEIAEKAQLNAVKAEEDVTNIMLLAEQAVAFELEATQRVNDAEIALQRADNSVSNLNADTTETIQVQDVEPVPEEEKVVQGFSGDATVERDTDLAIDDESLPAKLSPETLSDKTSQIAEEITPSDYLSDNENAVQTKKQETQKDLTRDSSPFAPKALLMKSSRFFSASFFSFTEDGAEFTPASVFQGFVSSAQKQLPKLVLGLLLMGAGVAFYANRAERNAQLLQPADVIVTNAEEVSSSAKPLVRKLQKLPKKIKKIIASLPHQEVTEEEASLFDMLWLLLASVIFVPIFQKLPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAVVAGLVAHYICGLPGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYRQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPVVTGTLGLLICGKTILVTLMGKIFGISLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMAITPWLAAGGQLIASRFEQHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATINEFRSRHLAELTELCEASGSSLGYGFNKIMSKPKSQSPDSLDEAQVSEGTLAI* 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01199 1208 MobiDBLite consensus disorder prediction 1187 1208 - -
Rops8g01199 1208 Pfam TrkA-N domain 1013 1126 IPR003148 GO:0006813
Rops8g01199 1208 Coils Coil 165 192 - -
Rops8g01199 1208 CDD UDM1_RNF168_RNF169-like 320 377 - -
Rops8g01199 1208 ProSiteProfiles RCK N-terminal domain profile. 1012 1134 IPR003148 GO:0006813
Rops8g01199 1208 MobiDBLite consensus disorder prediction 266 285 - -
Rops8g01199 1208 Coils Coil 292 347 - -
Rops8g01199 1208 MobiDBLite consensus disorder prediction 419 479 - -
Rops8g01199 1208 FunFam K(+) efflux antiporter 2 chloroplastic 600 986 - -
Rops8g01199 1208 FunFam K(+) efflux antiporter 2 chloroplastic 1008 1172 - -
Rops8g01199 1208 Coils Coil 369 389 - -
Rops8g01199 1208 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1009 1150 IPR036291 -
Rops8g01199 1208 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 206 1199 - -
Rops8g01199 1208 Gene3D - 1008 1172 - -
Rops8g01199 1208 Pfam Sodium/hydrogen exchanger family 610 980 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Rops8g01199 1208 Gene3D - 600 988 IPR038770 -
Rops8g01199 1208 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 611 891 IPR004771 GO:0006812|GO:0008324|GO:0016020
Rops8g01199 1208 MobiDBLite consensus disorder prediction 265 285 - -
Rops8g01199 1208 MobiDBLite consensus disorder prediction 437 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01199 Rops-Chr8 26106664 26128784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01199 3 1208 Inorganic Solute Cotransporters AT4G00630 66.504 0.0 1421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01199 K03455 - gmx:100798822 1909.42