Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops8g01174 | ATGCCATGTTGCATGGATTCACAAGTTGATGCATCTGTTGTTGAAGTTCCAGATGCCGAAAATGAGGATAGAATTGAGGCAAATAATGGGCCTGTATTTCATGAATTTACGTTCGAGCAACTTAATAATGCAACATCTGGTTTTGCTGTTGAGAATATAGTATCTGAACATGGAGAGAAGGCTCCAAATGTTGTTTATAAAGGGAAGATGGAGAATCAAATGAGGATTGCTGTTAAGCGGTTTAATAGAAATGCTTGGCCTGATGCAAGGCAATTTTTGGAGGAAGCTAGATCCGTTGGTCAGCTTCGTAACCAAAGATTGGCAAATTTGCTTGGTTGTTGTTGTGAAGGTGATGAGAGGTTGCTTGTGGCTGAATATATGCCCAATGAAACACTTGCAAAACACCTTTTCCATTGTAATGGCTCCTTTCATGCATATGTCATACTTTTTAATTTTGGACATCTGATCAGGGACACACAACCGATGAAATGGGCAATGCGACTCAGAGTTGTTCTACATCTTGCAGAAGCTCTAGAATACTGCACAAGCAAAGGGCGTGCCCTCTATCATGACCTTAATGCATATAGAGTTCTATTTGATGAGGATGGTAATCCTAGGCTTTCAAGTTTTGGCCTTATGAAGAACAGTCGGGATGGGAAAAGTTATAGCACAAATTTGGCGTTTACCCCTCCAGAGTATCTCAGAACTGGGAGAGTAACGCCAGAAAGTGTAATATATAGCTTTGGCACTCTTTTGCTTGACCTTCTAAGTGGGAAGCATATCCCCCCCAGTCATGCCCTTGATTTGATTCGAGACAGAAATCTTCAGATGCTAACAGATTCTTGTTTGGAAGGACAATTTTCTGATAATGATGGAACTGAGTTGGTGCGCTTGGCATCTCGATGTTTACAGTATGAACCTAGAGAACGGCCTAATCCAAAATCATTAGTGGCTGCTTTGGCTCTTCTTCAGAAAGAAACAGAGGTTCCTTCACACTTGTTGATGGGTATCATCACACATAGTGCTACTTTTGCTTCATTGACCCCACTTGGTGAAGCATGTTCAAGAAAGGACTTGACCGCCATACATGAAGTTCTTGAAAATATTGGCTATAAAGATGATGAAGGAGTTGCAAATGAGTTATCCTTCCAGATGTGGACTGATCAAATGCAGGACACACTAAATTGTAAGAAAAAAGGGGATGCTGCTTTCCGGCAGAAAGATTTCAGACTAGCAATTGAGTGCTACACTCAGTTCATTGATGTGGGAACGATGGTTTCTCCAACTGTCCATGCGCGGCGCAGTTTGTGTTATCTGATGAGTGACATGCCTCAGGAAGCTCTGAATGATGCAATGCAAGCACAAGTAATTTCCCCTGTATGGCACATTGCATCTTATCTTCAATCTGTTTCCCTGGCTGCACTGGGGATGGAGAATGAAGCACGAGTTGCACTTATAGAGGGAACAACATTGGAAGCCAAGCAAAATGGTGGAAGAAAGTAA | 1503 | 0.4198 | MPCCMDSQVDASVVEVPDAENEDRIEANNGPVFHEFTFEQLNNATSGFAVENIVSEHGEKAPNVVYKGKMENQMRIAVKRFNRNAWPDARQFLEEARSVGQLRNQRLANLLGCCCEGDERLLVAEYMPNETLAKHLFHCNGSFHAYVILFNFGHLIRDTQPMKWAMRLRVVLHLAEALEYCTSKGRALYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDNDGTELVRLASRCLQYEPRERPNPKSLVAALALLQKETEVPSHLLMGIITHSATFASLTPLGEACSRKDLTAIHEVLENIGYKDDEGVANELSFQMWTDQMQDTLNCKKKGDAAFRQKDFRLAIECYTQFIDVGTMVSPTVHARRSLCYLMSDMPQEALNDAMQAQVISPVWHIASYLQSVSLAALGMENEARVALIEGTTLEAKQNGGRK* | 501 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops8g01174 | 500 | FunFam | probable serine/threonine-protein kinase At4g35230 | 23 | 126 | - | - | |
Rops8g01174 | 500 | ProSiteProfiles | Protein kinase domain profile. | 51 | 323 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops8g01174 | 500 | Gene3D | Phosphorylase Kinase; domain 1 | 22 | 126 | - | - | |
Rops8g01174 | 500 | SUPERFAMILY | TPR-like | 392 | 487 | IPR011990 | GO:0005515 | |
Rops8g01174 | 500 | Gene3D | Tetratricopeptide repeat domain | 391 | 500 | IPR011990 | GO:0005515 | |
Rops8g01174 | 500 | SUPERFAMILY | Protein kinase-like (PK-like) | 30 | 331 | IPR011009 | - | |
Rops8g01174 | 500 | Gene3D | Transferase(Phosphotransferase) domain 1 | 128 | 338 | - | - | |
Rops8g01174 | 500 | PANTHER | SERINE/THREONINE-PROTEIN KINASE BSK5 | 13 | 496 | IPR045845 | GO:0004672|GO:0009742 | |
Rops8g01174 | 500 | FunFam | probable serine/threonine-protein kinase At4g35230 | 391 | 500 | - | - | |
Rops8g01174 | 500 | FunFam | probable serine/threonine-protein kinase At5g41260 | 150 | 337 | - | - | |
Rops8g01174 | 500 | Pfam | Protein tyrosine and serine/threonine kinase | 64 | 319 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops8g01174 | Rops-Chr8 | 25566458 | 25573611 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops8g01174 | 21 | 323 | Glycoside Hydrolase | AT3G07070 | 32.523 | 5.16e-42 | 153 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-XII-1 | Rops8g01174 | PK_Tyr_Ser-Thr | 6.2e-27 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops8g01174 | K14500 | - | gmx:100781311 | 864.374 |