Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01171 ATGTTGCTATCAGCTGGCAACGTTTCAGGAAGAAAACATGTGAACGTCACAAATACTTTGGATGGGAATCTGGACCTAACCCTTCACTGCAGATCTAAGAATGATGATCTTGGAGTCAAGCTTCTCCATCCTGGTGGGTTCTATGAATGGAGTTTTAATGTTGACTTTTTTGGGACAACGGAATTCAATTGTTCCTTTGTTTGGCAAGGTGCCTCTCACGATTTTCCTATATTCATAGCAAATAGGGATGGCCCTTGGTGCCAAACTTGCAATTGGTCTATAAAGCAAACTGGACCATGTAGGGAAGGGGAGTTCTTTAGGTGCTTTAAGTGGGATGAGTATGAACATCTTTTTGTTTGA 360 0.4167 MLLSAGNVSGRKHVNVTNTLDGNLDLTLHCRSKNDDLGVKLLHPGGFYEWSFNVDFFGTTEFNCSFVWQGASHDFPIFIANRDGPWCQTCNWSIKQTGPCREGEFFRCFKWDEYEHLFV* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01171 119 Pfam Plant self-incompatibility protein S1 13 111 IPR010264 -
Rops8g01171 119 PANTHER - 10 103 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01171 Rops-Chr8 25468334 25468693 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01171 4 113 Carbohydrate Esterase AT3G16970 34.746 1.26e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01171 - - fve:101312887 107.457