Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops8g01156 | ATGGCAACTGATATGCAGAGGTTTGTTGGAACAAGTGAAGATGAAGACGAAATGGTAATGGGTGTGAAAGATGAGGATGATGATGATGATGATTTTGAGGAAAATGGAGGTGAGCATGGGAATGCTCCAGGGATGGTAGAGATTGATGGTGGGAATGAGATAGGAACTGCCACTGGTGACAACAGGTTTCAACAACACCAGCAGTTTCAAGAGCAAGTCGGCACCCCAGGTGGAGGTACTCGAAGATCTAGGCCCCTAGAAGAGAAAGAGAGAACGAAGCTAAGAGAGAGGCGCCGGAGGGCTATCACTGCAAGGATCTTGGCAGGGCTTCGCAGGCATGGCAACTACAATCTTAGAGTTAGGGCAGACATAAATGATGTCATTGCTGCTCTAGCAAGGGAGGCTGGATGGGTGGTTCTTCCAGATGGCACTACTTTTCCCTCAAGATCTCAGGGTCAAAAGCCAGCTGGTGGTAATTCGACAGCTGTCACTTCATCATCTTCCCATGTACCTCCACAACAGACTCCATCTGCTTCCCTCAGGGGGGTTGCTTCTGGCTTTAGAAGCCCTTTAGAGTATAATTCATGTCAATTGAAAGGTGTTTTTATTCCAGCTCCATCTCCTTATGATCTATCCTCAAGTTCCCGATCTCAAACATCTATGGTGGGGGATGGAGAAGAACAAAGAGACAATCGTCCTATGATTGGTGGTTCAATGGATAATGTTGACGAGAAGCAGATTGTTGACATGCCCCCTAGATTACCAGAGCGTGATTTGGCTGGTACCCCATATGTTCCGGTTTACGTGATGCTACCATTGGGGGTGATCAATATTAAATGTGAGCTTGTTGATCCGGATGGTCTACTAAAGCAGCTGAGGGTGTTGAAATCAGCGAATGTTGATGGTATAATGGTAGACTGTTGGTGGGGAATAGTGGAGGCACACGCTCCACAAGAGTATAACTGGAATGGTTACAAGAGACTCTTTCAAATAGCGCGTGAGCTTAAGCTTAAGCTGCAGGTTGTGATGTCTTTTCATGAATGTGGAGGCAATTTTGGTGACGATGTTTGTATTCCATTGCCCCATTGGGTTGCTGAAATTGGTAGGAGCGATCCTGACATTTTTTTCACTGATAGAGAGGGGAGACGCAACCCTGAATGTCTTTCTTGGGGAATAGATAAGGAACGGGTTTTAAGAGGTCGGACTGCTGTGGAGGTTTATTTTGATTTCATGAGAAGCTTTCGGGTAGAGTTTGATGATTATTTTGAGGATGGCTTCATCTCCATGATTGAAGTTGGACTAGGTCCATGTGGAGAGCTAAGATACCCATCTTGTCCTGTAAAGCATGGTTGGAGATATCCTGGTATTGGTGAATTCCAGTGCTATGATCAGTATATGTTGAAAAGTCTTAGGAAAGTGGCAGAAGTAAGGGGGCACTCTATTTGGGCTAGAGGGCCAGATAATGCGGGTACCTATAATTCTCAGCCACATGAAACAGGTTTCTTTTGTGATGGGGGTGATTATGATGGCTTCTATGGCAGGTTTTTTCTTAACTGGTACTCTCAGGTTCTAGTTGATCATGGAAACCGGGTACTTTCTCTGGCAAAATTAGCTTTTGAGGGTTCCTGCATTGCTGCGAAGCTATCAGGTATATACTGGTGGTACAAGACTGCCAGTCATGCTGCTGAATTAACTGCTGGGTATTATAACCCATGCAATCGTGATGGCTATGCTGCAATTATGACAATGTTAAAGAGAAATGGAGTTAGCTTAAACATTGCTTGTGTTGACCTCCACACATTGAACCAGCATGAGGGCTTTCCTGAGACATTTGCAGATCCTGAGGGATTAGTATGGCAAATTTTGAATGCTGGGTGGGATGTTGGCCTACCAGTTGGCAGTGAGAATGCACTTCCTTGCCTAAACAGAGTTAGCTATAACAAGGTATTGGATAATGCCAAGCCCATGAATGATCCAGATGGAAGACACTTTTCATCCTTTACTTACCTGAGGCTTAGTCCACTTCTTATGGAACGACAAAACCTCATAGAGTTTGAACGATTTGTCAAGAGAATGCACGGCGAAGCTGTTCTTGATCTTCAGGTATAA | 2109 | 0.4481 | MATDMQRFVGTSEDEDEMVMGVKDEDDDDDDFEENGGEHGNAPGMVEIDGGNEIGTATGDNRFQQHQQFQEQVGTPGGGTRRSRPLEEKERTKLRERRRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSQGQKPAGGNSTAVTSSSSHVPPQQTPSASLRGVASGFRSPLEYNSCQLKGVFIPAPSPYDLSSSSRSQTSMVGDGEEQRDNRPMIGGSMDNVDEKQIVDMPPRLPERDLAGTPYVPVYVMLPLGVINIKCELVDPDGLLKQLRVLKSANVDGIMVDCWWGIVEAHAPQEYNWNGYKRLFQIARELKLKLQVVMSFHECGGNFGDDVCIPLPHWVAEIGRSDPDIFFTDREGRRNPECLSWGIDKERVLRGRTAVEVYFDFMRSFRVEFDDYFEDGFISMIEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYMLKSLRKVAEVRGHSIWARGPDNAGTYNSQPHETGFFCDGGDYDGFYGRFFLNWYSQVLVDHGNRVLSLAKLAFEGSCIAAKLSGIYWWYKTASHAAELTAGYYNPCNRDGYAAIMTMLKRNGVSLNIACVDLHTLNQHEGFPETFADPEGLVWQILNAGWDVGLPVGSENALPCLNRVSYNKVLDNAKPMNDPDGRHFSSFTYLRLSPLLMERQNLIEFERFVKRMHGEAVLDLQV* | 703 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops8g01156 | 702 | PANTHER | BETA-AMYLASE 1, CHLOROPLASTIC | 214 | 695 | IPR001554 | GO:0000272|GO:0016161 | |
Rops8g01156 | 702 | MobiDBLite | consensus disorder prediction | 18 | 35 | - | - | |
Rops8g01156 | 702 | MobiDBLite | consensus disorder prediction | 1 | 96 | - | - | |
Rops8g01156 | 702 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 79 | 217 | IPR008540 | - | |
Rops8g01156 | 702 | PRINTS | Plant beta-amylase signature | 683 | 697 | IPR001371 | GO:0000272|GO:0016161 | |
Rops8g01156 | 702 | PRINTS | Plant beta-amylase signature | 425 | 434 | IPR001371 | GO:0000272|GO:0016161 | |
Rops8g01156 | 702 | PRINTS | Plant beta-amylase signature | 668 | 682 | IPR001371 | GO:0000272|GO:0016161 | |
Rops8g01156 | 702 | Pfam | Glycosyl hydrolase family 14 | 268 | 687 | IPR001554 | GO:0000272|GO:0016161 | |
Rops8g01156 | 702 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 559 | 570 | IPR001554 | GO:0000272|GO:0016161 | |
Rops8g01156 | 702 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 577 | 600 | IPR001554 | GO:0000272|GO:0016161 | |
Rops8g01156 | 702 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 320 | 338 | IPR001554 | GO:0000272|GO:0016161 | |
Rops8g01156 | 702 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 542 | 558 | IPR001554 | GO:0000272|GO:0016161 | |
Rops8g01156 | 702 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 617 | 639 | IPR001554 | GO:0000272|GO:0016161 | |
Rops8g01156 | 702 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 508 | 527 | IPR001554 | GO:0000272|GO:0016161 | |
Rops8g01156 | 702 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 299 | 313 | IPR001554 | GO:0000272|GO:0016161 | |
Rops8g01156 | 702 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 435 | 457 | IPR001554 | GO:0000272|GO:0016161 | |
Rops8g01156 | 702 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 342 | 363 | IPR001554 | GO:0000272|GO:0016161 | |
Rops8g01156 | 702 | MobiDBLite | consensus disorder prediction | 82 | 96 | - | - | |
Rops8g01156 | 702 | MobiDBLite | consensus disorder prediction | 146 | 181 | - | - | |
Rops8g01156 | 702 | SUPERFAMILY | (Trans)glycosidases | 261 | 698 | IPR017853 | - | |
Rops8g01156 | 702 | MobiDBLite | consensus disorder prediction | 57 | 77 | - | - | |
Rops8g01156 | 702 | Gene3D | Glycosidases | 256 | 701 | - | - | |
Rops8g01156 | 702 | MobiDBLite | consensus disorder prediction | 209 | 239 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops8g01156 | Rops-Chr8 | 24365782 | 24373069 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops8g01156 | 1 | 699 | Glycoside Hydrolase | AT2G45880 | 65.007 | 0.0 | 949 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | BES1 | Rops8g01156 | Glyco_hydro_14 | 2.1e-104 | CL0058 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops8g01156 | K01177 | - | gmx:100805560 | 1233.01 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Rops8g01156 | 8 | 24365782 | 24373069 | Rops8g01156 | 8 | 24365782 | 24373069 | ECH |