Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01145 ATGGCAAAGAAGTCCCAAAGATTCCCTGTGCAGTTTGAGAAAGATCAGTCAGGTTGTATGTGGGGTTTTATTAGTATATTTGATTTTCGCCATGGCCGCTTTACTCGGAAGTTGATTGCAGATAAGAGGCACAACAGGAAGCATGCTGTTGATGATGTACCTACCAAAAACAAATTTGAGATGTTGAGCAATTTGGATGAAGAATATCAAGGCAATTTTGACAGAGGAGAGAGTAAGAGACTAACAGTAACAACTGAAACTGATAAGCCTAGTGTGAAGAAACTCATAGAAGAAGAGATGTTCATTGACCAGGATGAAATAAAGGATCAAGGTAATGCTGAAGTAGAATCAAAGCAATCGAGATTAGGGCATGAATCCAAGCAGAAAGATTCCAAAAGAAAAAAGAAATCTCGCAAGAAAAGCCGTGATATGGACACCCATGATACAAATGCAACCTTGAAATCTGAATCGTCACATAATCAGCATTCAAAGCAACAATCAAAAGATAATCTTGATTTGGACAAGATAACGGAAGATTTTTGTCATATAGAAGCTGCTTGTTCCATGATGCATGACAATGATGGCAAAGTTCATGCACAATCAAACCAAAAACATGTTATTTCTGAAGACCTTGCAAGAGATGCAATCCATGAATTTGTGAATCAGATGACCTTGAATGGGAAAGATCCGGTAGAAGATAGAAAATTTCTCTGCTCACATGAACTCATTGAAGCACTTCAGGTTATAAGCTCAGATAAGGAATTGTTTCTTAGACTTCTACAAGACCCAAATTCAAACTTACTGAAATATATTCAGGAGTTGGAGAATGCTCAAGGGAGAAGTGACAAAGAACACAGTTCAGTTACTGGCTCCAACTTCACTGAACAAGACCTTGGCAATCTGAAACAAAGTAGGGATATTGTCAACCGCAAGCATCGTAACTTTTTCAAGAAAAAGGTTAAGTGTCAATCAAAAGGTCCAACAAATAAAAATGGGAAAACTGAGATTTCAAATAGAATTGTCATTCTGAAACCTGCACTGATGGGCATGCAAAATTATGAAAGTGAAAACAACCTTGCCTCATCACTGGATTCTCAAGATATTGTCCATTACAAAGGTCCTTCTGTGAGAGGTACTTCACATTTTTCTCTTACAGAGATAAAAAAGAAATTAAAACATGCTATGGGAAAGGAGAGACATGGAAACCCTGATCTCCCTGCTAAACGTCAAAATAAGGGGCCAGGAGGCAAAGCCATTGGTAAAGATAATGTTGGGATGAGATCTCCTAATAAAGATCATTTCTTCATGGAAAAAATTGCAAGGCCTATGTTTGATGTGATGAGAGGAAACAAGACTGGTACATCGAAAAACTTTGAATTTAATATGGAACATGATAGTGGTACTCCTAAAGAAAGTGTTTCTAACATATATATCGAAGCTAAGAAACATCTCTGTGAGATGCTAGATAATGGAGATGAAAGCACAAACATTTCAAACAGGAAAATTCCCAAAACCCTTGGGAGAATACTATCTCTTCCCGAGTACAACTTTTCTCCTCTTGGAAGTCCTGGACGGAATTTGGAGCATCATTTTGTGACTGCACATGCAAGATTTTCTACTTCAGATAAAACTTGTGAGATTAATGAGGATAATTTGTCTCCCAAACAAGCAACCTCAATTGGTCATCTGGATCAGGAAACAAACAATTCGGAGAACCAGTCAAGCGTTTGTGATGAAAGCTCCAATAGTAAAATACCAGAAATTAAGTCAACTTTTTCACTTGATCTTGATCATGTTGATACATCCAAAGCATGTTGTCCTGTTACAGATGAGATAGTTACTGAAGGTAATTTAGAATCTACAGAAGAGATAAATGTTTTGGATTCTTCCTCAGATCCAAATGGCTTTGTTGCAGGGAAGGACCAAAATCATGATATCTCAGAAATTCCTGATGGATGTTCTGAATGTTTGAATGAGGATGTAACTGAAGAGAACCAACCATCATCTCCCCTGTCATCCCCTTCTCACTCTTTGATCACTAAGAAAATTGAAGAGCTAGAAAGTTGTACAGATGTATCTGGGCGACCAAGTCCTGTATCTGTGCTCGAAATACCATTCTCAGATGATGACTTCGGCCCTGGGTACTCCAGATGTGAACCTGTTAAATTACCGGTACAACCACTACGAATTCAATTTGAAGAACGTGACTCTTCACCCGTGGATCAATTTGATAGAGGAAAATGTTGTCTTGAAGAAAATGAATTGATATATGACTATGTTAGTGCTGTCTTGCTTGCCTCTGGCTTGACAAGAGATCAATTGTTGATGAGATGCCTTTCCTCAGACAAGATACTAGATCCTTGCTTGTTTGATCAGGTTGAGTTCTTCTCAAACCAGCTTTGCCATGATCAGAAGCTCCTATTCGATTGTATCAACGAAGTTGTCATGGAGGTTTGTTGGCATTACTTTGGGGTCTCACCTTGGGTATCATTTGTGAATCCTAGCATAAGGCCAGCTCCAAGCATGAAAAAGCTTATTCTCATGGTCTGGGAAGGAGTGTGCTGGCATGTCCTTCCCTTCCCCCCACCTCATACTTTGGAGCAAATTGTTAGGAAAGACATGGCAAGAAATGAAACATGGATGGATCTTCGACTTGATGCTGAAACAGTTGGTTTTGAAATGGCCGAGGCCATTCTTGCAGAACTGATGGAAGAAACAATATTGAGCCTTGAGAGTGAAAGTACAGAAAGTGAATGTTCTCTGCTTCAATTTGAATTGAAGGACAATGAGAGCAGTATTAACTTGTAA 2808 0.3878 MAKKSQRFPVQFEKDQSGCMWGFISIFDFRHGRFTRKLIADKRHNRKHAVDDVPTKNKFEMLSNLDEEYQGNFDRGESKRLTVTTETDKPSVKKLIEEEMFIDQDEIKDQGNAEVESKQSRLGHESKQKDSKRKKKSRKKSRDMDTHDTNATLKSESSHNQHSKQQSKDNLDLDKITEDFCHIEAACSMMHDNDGKVHAQSNQKHVISEDLARDAIHEFVNQMTLNGKDPVEDRKFLCSHELIEALQVISSDKELFLRLLQDPNSNLLKYIQELENAQGRSDKEHSSVTGSNFTEQDLGNLKQSRDIVNRKHRNFFKKKVKCQSKGPTNKNGKTEISNRIVILKPALMGMQNYESENNLASSLDSQDIVHYKGPSVRGTSHFSLTEIKKKLKHAMGKERHGNPDLPAKRQNKGPGGKAIGKDNVGMRSPNKDHFFMEKIARPMFDVMRGNKTGTSKNFEFNMEHDSGTPKESVSNIYIEAKKHLCEMLDNGDESTNISNRKIPKTLGRILSLPEYNFSPLGSPGRNLEHHFVTAHARFSTSDKTCEINEDNLSPKQATSIGHLDQETNNSENQSSVCDESSNSKIPEIKSTFSLDLDHVDTSKACCPVTDEIVTEGNLESTEEINVLDSSSDPNGFVAGKDQNHDISEIPDGCSECLNEDVTEENQPSSPLSSPSHSLITKKIEELESCTDVSGRPSPVSVLEIPFSDDDFGPGYSRCEPVKLPVQPLRIQFEERDSSPVDQFDRGKCCLEENELIYDYVSAVLLASGLTRDQLLMRCLSSDKILDPCLFDQVEFFSNQLCHDQKLLFDCINEVVMEVCWHYFGVSPWVSFVNPSIRPAPSMKKLILMVWEGVCWHVLPFPPPHTLEQIVRKDMARNETWMDLRLDAETVGFEMAEAILAELMEETILSLESESTESECSLLQFELKDNESSINL* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01145 935 MobiDBLite consensus disorder prediction 103 127 - -
Rops8g01145 935 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 910 - -
Rops8g01145 935 Pfam Protein of unknown function (DUF3741) 221 265 IPR022212 -
Rops8g01145 935 MobiDBLite consensus disorder prediction 103 171 - -
Rops8g01145 935 MobiDBLite consensus disorder prediction 397 427 - -
Rops8g01145 935 Pfam Domain of unknown function (DUF4378) 758 905 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01145 Rops-Chr8 24147102 24153516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01145 1 895 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 33.769 2.84e-115 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01145 - - gmx:100783243 1323.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01145 8 24147102 24153516 Rops8g01145 8 24147102 24153516 ECH
Rops8g01145 8 24147102 24153516 Rops4g01488 4 37630834 37637492 PCT