Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01135 ATGGATATAGAGGAAGCCCCACAAATCCCCAGAAGAATTACCAGGTCTTCAGCTTCATCTTCAGCATCCACTCCAAATAATGTACCTGCAACAAAAGTAAATAGCCTTGAACCTATAACAATTAATGACCTTTTAGTTGGAGGAGGCCCCATTAGCCTAGATGATATAATTTCTAGTTTTACTGGTAGAAGAAGCCAGATTCTTGAGATTGTGCGTCTTTTGGGACCTTTGAATTCTCCAATGCTTCCTTTGTTTGTGTATGGAGGTGCTTCTACTGGAAAAAGCAGTATCATTCTTCAAATATTCAGGCATCTCAACAGGCCTCTTGTTTATTCTAGTTGTAGGACGTGTTATAACCAGCGTATCTTGTTTGAGTCTATTCTAAATCAGTTACTTCTCCATAGAAAAAATGCTGCCAATGGTTATTCAAATGTAAAGCGCTGTGAAAGACCATCTGATTTTGTCAATTTTCTTCGAGAAGCATTGACCAATGTTATAAACAATCTAAAAGAGAAGTCGAGCTCGAATAAGATGATACATGGGGGAATTGGAAATATGATCTACTTGGTATTTGACAATTTTCAGCTTGTCAGGGAATGGGATAAGAGCTCTACTATATTGCCCTTACTGTTTAATCTTAATGATCTGCTAAAGATGCCTGAGGTGGGTCTAATTTTTATCAGCAGTACTTCCCCAGATACTTTTTACTCTAACATGGGTTATGTGGAGCCTATCCCCATTTACTTTCCAGATTACACAGAAGGTGATATTCGTCAAATATTATTGAGAAACCAAGCAAACCAGAAGTTGTATTCCTCATTTCTGGATGTAGCTCTGAAGCCTTTCTGTAGAATTACTAGGCAGGTTGGTGAATTGTCTACTGCCTTAAAGCCACTATATGAAAAATATTGTGAACCTTTAAGTGATAAGGGAGTTGTTCCTAATCAAGACATGAAACGAAGGTTATTCAGTCTTATCAAGCCTCATATTGTCTCCTCTCTGAATGAGATATTTAAGGTTTCATCACTTCCATCAACTGAAGTTGAGACCTCTAAAGAGACAAAGCCTCAGGGGAATCGCAAGAGATTAGAAAAATCTGAAGTTGGTGATTTAGATTTTCATATGTCTACCAGTGCTAAGTATCTTCTTATTTCAGCATTTCTTGCCTCCAGAAACCCTGCAACTCTTGATGCTTCATTTTTTGATTCCAAAGGTGGTTCTGATATTCGAAAGCGAAAGAGGAAGCCCTCTGAGAAAGCGATGGAAAAGAAGGAAAGTTTAGAAGATGAACTACTAATGAAAGGACCTGGAACTTTCCCATTGGAGAGGCTGTTAGCCATATTTCAGTGTATTGTATCAGTTGCAGAAGAGCCATCTGATGAGGAGGAACAAGACAATGATGGATTTGGAGTTCAATGTGGCAATGGTGGACTAATGTCTGACATTCTTATGCAACTATCCAGTCTCTGCAATGCAAATTTTATATTCAAAGGAAGAAGCTGTCCAATAGAAGGCTCAACTCGGTATCGATCAACTATATCTGAAGACCTGGCTTTGAAGGTTGCAAGGAGCCTTAAGTTGCCGTTATCAAAGTATTTGTATAGAAGATAG 1611 0.3849 MDIEEAPQIPRRITRSSASSSASTPNNVPATKVNSLEPITINDLLVGGGPISLDDIISSFTGRRSQILEIVRLLGPLNSPMLPLFVYGGASTGKSSIILQIFRHLNRPLVYSSCRTCYNQRILFESILNQLLLHRKNAANGYSNVKRCERPSDFVNFLREALTNVINNLKEKSSSNKMIHGGIGNMIYLVFDNFQLVREWDKSSTILPLLFNLNDLLKMPEVGLIFISSTSPDTFYSNMGYVEPIPIYFPDYTEGDIRQILLRNQANQKLYSSFLDVALKPFCRITRQVGELSTALKPLYEKYCEPLSDKGVVPNQDMKRRLFSLIKPHIVSSLNEIFKVSSLPSTEVETSKETKPQGNRKRLEKSEVGDLDFHMSTSAKYLLISAFLASRNPATLDASFFDSKGGSDIRKRKRKPSEKAMEKKESLEDELLMKGPGTFPLERLLAIFQCIVSVAEEPSDEEEQDNDGFGVQCGNGGLMSDILMQLSSLCNANFIFKGRSCPIEGSTRYRSTISEDLALKVARSLKLPLSKYLYRR* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01135 536 Gene3D - 60 238 IPR027417 -
Rops8g01135 536 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 52 535 IPR020796 GO:0000808|GO:0005634|GO:0006260
Rops8g01135 536 Pfam AAA ATPase domain 60 215 IPR041664 -
Rops8g01135 536 MobiDBLite consensus disorder prediction 12 29 - -
Rops8g01135 536 FunFam Origin of replication complex subunit 5 60 238 - -
Rops8g01135 536 MobiDBLite consensus disorder prediction 345 366 - -
Rops8g01135 536 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 269 IPR027417 -
Rops8g01135 536 MobiDBLite consensus disorder prediction 1 29 - -
Rops8g01135 536 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 247 533 IPR047088 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01135 4 536 Core DNA Replication Machinery Family AT4G29910 60.335 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01135 K02607 - gmx:100782175 860.136