Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01118 ATGTGCAGCCATGATGCTGCAATGGAATTACTAGAAGAAATTGATGGAGGCAAAATGTTTGCAAATGATGTAAACAAAGAAAGCTTTGATCGTAAGAGGAGAATTGAATCTATGTCCGAAATACTAAGCTGGGTTACTGCTATTGCAAATAATCCTTGTGATCCTGCAGTTGGCTCATTGCCAGAAAAGTCAAAGTGGAAGTCCTACAGTAATCAAGAGATTTGGAAGCAGGTTTTGTTATTTCGAGAAGCTGTCTCTATTAAAAATGGTTTTGAATCAAGCAATGAACAACGTAGATGGCAGGGTCACAAGATGCATCCTTCCATGTATGATGATCATCACCTTGCGGTAACCTACTATTTAAGACAAAGGGTCAAACGCGACAATAGACTTTTATTTGGAAAATTTACATCTGGTGAAATCTCTTCTGATTCATTTGGAACACACTCAAGTCTTGATAAATGTGGCACAATGCAAATTCCTCTGGGGCCAACCCATCAAGCCGAAGTATCTGAATGGACTGGCATGACTTATGAGAGCGATTCAAAGTGGTTAGGGACCAAAATATGGCCATCAAAAACCACAATTTCCAAACTTCAAGATAGGGACCCCATTGGAAAAGGAAGACAAGAATCATGTGGTTGTCAAGTACAAGGTTCCATTGAGTGTGTCCAATTCCACATCACTGAGAAAAGGGCTAAAGTTAACTTGGAATTGGGTGTGGCTTTTTACCAGTGGAATTTACACAATGGAGGTGAAGATGTTAGGCGTTTGTGGACTGAGCAAGAAGAGAAGAAGTTCAAAGACGTGGTGAAATCAAACCCTCGTTCACCCAATAGATGTTTCTGGGATGATATATTTGAAACATTTCCAAATAAAAGCAGGGAAAATCTGGTTAGCTATTACTTCAATGTATTTCTTTTGCAGCGCAGACGGCACCAAAATAGGCATACACAAAATAACATTGATAGTGATGATGATGAATTAGAAGTTGGACCATTGAGGAATGTTTTTGGACGTCACACAAATAAATTGCGCAACTTCACCTTATTATCCCCTAAGAAGCCACAAAGAAAGGGAAGATAG 1086 0.3932 MCSHDAAMELLEEIDGGKMFANDVNKESFDRKRRIESMSEILSWVTAIANNPCDPAVGSLPEKSKWKSYSNQEIWKQVLLFREAVSIKNGFESSNEQRRWQGHKMHPSMYDDHHLAVTYYLRQRVKRDNRLLFGKFTSGEISSDSFGTHSSLDKCGTMQIPLGPTHQAEVSEWTGMTYESDSKWLGTKIWPSKTTISKLQDRDPIGKGRQESCGCQVQGSIECVQFHITEKRAKVNLELGVAFYQWNLHNGGEDVRRLWTEQEEKKFKDVVKSNPRSPNRCFWDDIFETFPNKSRENLVSYYFNVFLLQRRRHQNRHTQNNIDSDDDELEVGPLRNVFGRHTNKLRNFTLLSPKKPQRKGR* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01118 361 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 26 356 - -
Rops8g01118 361 SMART ELM2_2 160 210 IPR000949 -
Rops8g01118 361 SMART sant 255 308 IPR001005 -
Rops8g01118 361 Pfam Myb-like DNA-binding domain 258 305 IPR001005 -
Rops8g01118 361 Gene3D - 259 326 - -
Rops8g01118 361 CDD SANT 259 306 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01118 Rops-Chr8 23740391 23742000 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Rops8g01118 Myb_DNA-binding 5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01118 - - gmx:102667655 459.529