Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01117 ATGAAAAAAAGATCTTTTCTTCTTTTAGGATCCAAAGTGCAAGATGGTCAAGGGAAGATGATTGTTACAACTGTTGGCATGAGGACTGAATGGGGGAAGTTGATGGGATTACCATTAGCTGTGACACTCAGTCTTGCTTTTGCAATGAAAAAATTAATGAAGGACAGGGCACTTGTGAGACATCTTTCTGCATGTGAGACTATGGGTTCTGCTACTTGCATCTGCACAGATAAGACAGGGACTTTGACCACTAACCATATGGTGGTTAATAAAATTTGGATATGCGGAAAGGCCATGGAGATGAAAGGTAATGTCGGTCAAGGCATAAACCTGGAAACAGAGATGTCTGAAGAAGTTCTAAGCATTCTTTTGCAAGCTATATTTCAAAATACTTCATCAGAAGTAGTTAAGGACAAAGATGGAAATAGGACAATATTGGGAAATCAGTGCAAGCTTTGA 459 0.3922 MKKRSFLLLGSKVQDGQGKMIVTTVGMRTEWGKLMGLPLAVTLSLAFAMKKLMKDRALVRHLSACETMGSATCICTDKTGTLTTNHMVVNKIWICGKAMEMKGNVGQGINLETEMSEEVLSILLQAIFQNTSSEVVKDKDGNRTILGNQCKL* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01117 152 Gene3D - 37 71 - -
Rops8g01117 152 Gene3D - 72 84 IPR023214 -
Rops8g01117 152 SUPERFAMILY HAD-like 63 127 IPR036412 -
Rops8g01117 152 ProSitePatterns E1-E2 ATPases phosphorylation site. 77 83 IPR018303 -
Rops8g01117 152 PANTHER CATION TRANSPORTING ATPASE 3 36 - -
Rops8g01117 152 SUPERFAMILY Calcium ATPase, transmembrane domain M 36 69 IPR023298 -
Rops8g01117 152 Gene3D - 85 102 IPR023299 GO:0000166
Rops8g01117 152 Gene3D - 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01117 Rops-Chr8 23684946 23685404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01117 2 35 Primary Pumps ATPases AT3G57330 73.529 9.03e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01117 K01537 - gmx:100791934 187.963