Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01109 ATGTCCGAAATGCTAAGCTGGGTTACTGCTATTGCAAAGAATCCTTGTGATCCTGCAGTTGGCTCATTGCCAGAAAAGTCAAAGTGGAAGTCCTACAGTAATCAAGATATTTGGAAGCAGGTTTTGTTATTTCGAGAAGCTGTCTCTATTAAAAATGGTTTTGAATCAAGCCATGAACAACGTAGATGGCAGGGTCACAAGATGCATCCTTCCATGTATGATGATCATCACCTTGCGGTAACCTACTATTTAAGACAAAGGGTCAAACGCGACAATAGACTTTTATTTGGAAAATTTACATCTGGTGAAATCTCTTCTGATTCATTTGGAACACACTCAAGTCTTGATAAATGTGGCACAATGCAAATTCCTCTGGGGCCAACCCATCAAGCCGAAGTATCTGAATGGACTGGCATGACTTATGAGAGCGATTCAAAGTGGTTAGGGACCAAAATATGGCCATCAAAAACCACAATTTCCAAACTTCAAGATAGGGACCCCATTGGAAAAGGAAGACAAGAATCATGTGGTTGTCAAGTACAAGGTTCCATTGAGTGTGTCCAATTCCACATCACTGAGAAAAGGGCTAAAGTTAAGTTGGAATTGGGTGTGGCTTTTTACCAGTGGAATTTACACAATGGAGGTGAAGATGTTAGGCGTTTGTGGACTGAGCAAGAAGAGAAGAAGTTCAAAGACGTGGTGAAATCAAACCCTCGTTCACCCAATAGATGTTTCTGGGATGATATATTTGAAACATTGCCAAATAAAAGCAGGGAAAATCTGGTTAGTTATTACTTCAATGTCTTTCTTTTGCAGCGCAGAGGACACCAAAATAGACATACACAAAATAACATTGATAGTGATGATGATGAATCAGAAATTGGACCATTGAGGAATGTTTTTGGACGTCACACGAATAAATTCCGCAGCTTCACCTTATTATCCCCTAAGAAGTCACAAAGAAATGGAAGATAG 975 0.3979 MSEMLSWVTAIAKNPCDPAVGSLPEKSKWKSYSNQDIWKQVLLFREAVSIKNGFESSHEQRRWQGHKMHPSMYDDHHLAVTYYLRQRVKRDNRLLFGKFTSGEISSDSFGTHSSLDKCGTMQIPLGPTHQAEVSEWTGMTYESDSKWLGTKIWPSKTTISKLQDRDPIGKGRQESCGCQVQGSIECVQFHITEKRAKVKLELGVAFYQWNLHNGGEDVRRLWTEQEEKKFKDVVKSNPRSPNRCFWDDIFETLPNKSRENLVSYYFNVFLLQRRGHQNRHTQNNIDSDDDESEIGPLRNVFGRHTNKFRSFTLLSPKKSQRNGR* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01109 324 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 2 319 - -
Rops8g01109 324 Pfam Myb-like DNA-binding domain 221 268 IPR001005 -
Rops8g01109 324 Gene3D - 222 291 - -
Rops8g01109 324 SMART sant 218 271 IPR001005 -
Rops8g01109 324 CDD SANT 222 269 IPR001005 -
Rops8g01109 324 SMART ELM2_2 123 173 IPR000949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01109 Rops-Chr8 23512345 23513833 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Rops8g01109 Myb_DNA-binding 3.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01109 - - gmx:102667655 457.603