Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01106 ATGCGCAACAATGATGCTGCAATGGAAATATTGGAAGAAGTTGATGGAGGCAGAATGTTTGCAAATGATGTAAACAAAGAGAGCTTTGGTCGTAAGAGGAAGATTGAGTCTATGTTCGAAATGCTAAGCTGGGTTACTGCCATTGCCAAGAATCCTTGTGACCCTGCAGTTGGCTCATTGCCTCGAAAGTCAAAGTGGAAGTCTTATAGTAACCAAAAGATCTGGAAGCAGGTTTTGTTGTTTCGAGAAGTTGTCTCTTTGAAAAATGGTTTTGAATCAAGTAGAGAACAGAGTTGGCAGGGTCAGAAGATGCATCCTTCCATGTATGATGACCACCACCTTGCGATAACTTACAATCTAAGACTGAGGGTAAAATCCGACAAGAGACTTTTATCTGAAAAGTCTACATTTGATGAAGTCTCTTCAGATTCATCTGAAACACACTCAAGTCTTGATAGATGTCGCACAGTGCAAATTCCTCTGGGACCAACCCATCAAGCTGAAGTATCTGAATGGACTGGCATGACTTATGAGAGTGATTCTAAGTGGTTGGCGATCAAAATATGGCCATCAAAAACAAGAATTTCCCAACTTCTAGAGAAGGACCCCGTTGGAAAGGGAAGACAAGATTCATGTGGTTGTCATGTAGAAGGATCTGTTGAGTGTGTCCAATTCCACATTACTGAGAAAAGGGCTAAAGTTAAGTTGGAATTGGGTGTGGCATTTTACCAATGGAATTTACACAATGCAGGTGAAGAAGTTAGGCGTCTATGGACTCAACAAGAAGAGAAGAGGTTCGAAGATGTGGTGAAATCAAACCCCTCTTCACTCGGTAGATGTTTCTGGGATCATATTTTCAGAACATTTCCAGATAAAAGCAGGGAAAATCTAGTCAACTACTACTTCAATGTCTTTCTTTTGCAGCGCAGAAGATACCAGAATAGGCATACTAAAAATAAAATTGACAGTGATGATGATGAATCAGAATTTGTACGACCGAGGAATGTTTTTGGACGTCAAACAAATAAAACATGCAGCTTCACCTTATCCCTTGAGAAGCCACAACGAAAGGGAAGATAG 1080 0.4056 MRNNDAAMEILEEVDGGRMFANDVNKESFGRKRKIESMFEMLSWVTAIAKNPCDPAVGSLPRKSKWKSYSNQKIWKQVLLFREVVSLKNGFESSREQSWQGQKMHPSMYDDHHLAITYNLRLRVKSDKRLLSEKSTFDEVSSDSSETHSSLDRCRTVQIPLGPTHQAEVSEWTGMTYESDSKWLAIKIWPSKTRISQLLEKDPVGKGRQDSCGCHVEGSVECVQFHITEKRAKVKLELGVAFYQWNLHNAGEEVRRLWTQQEEKRFEDVVKSNPSSLGRCFWDHIFRTFPDKSRENLVNYYFNVFLLQRRRYQNRHTKNKIDSDDDESEFVRPRNVFGRQTNKTCSFTLSLEKPQRKGR* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01106 359 Gene3D - 258 329 - -
Rops8g01106 359 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 24 346 - -
Rops8g01106 359 Pfam Myb-like DNA-binding domain 257 304 IPR001005 -
Rops8g01106 359 SUPERFAMILY Homeodomain-like 257 305 IPR009057 -
Rops8g01106 359 CDD SANT 258 305 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01106 Rops-Chr8 23458373 23460299 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Rops8g01106 Myb_DNA-binding 9.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01106 - - gmx:102667655 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01106 8 23458373 23460299 Rops8g01106 8 23458373 23460299 ECH
Rops8g01106 8 23458373 23460299 Rops4g01502 4 37859657 37863318 PCT