Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01105 ATGCATCCTTCAATGTACGATGACCACCACCTTGCGATAACTTACAATCTAAGACTGAGGGTAAAATGCGACAAGAGACTTTTATCTGGAAAGTCTACATTTGATGAAGTCTCTTCAGATTCATCTGAAACACACTCAAGTCTTGATAGATGTCGCACAGTGCAAATTCCTCTGGGACCAACCCATCAAGCTGAAGTATTTGAATGGACTGGCATGACTTATGAGAGTGATTCTAAGTGGTTGGGGACCAAAATATGGCCATCAAAAACAAGAATTTTCCAACTTCTAGAGAAGGACCTCGTTGGAAAGGGAAGACAAGATTCATGTGGTTGTCATGTAGAAGGATCTGTTGAGTGTGTCCAATTCCACATTACTGAGAAAAGGGCTAAAGTTAAGTTGGAATTGGGTGTGGCATTTTACCAATGGAATTTACACAATGCAGGTGAAGATGTTAGGCGTCTATGGACTCAACAAGAAGAGAAGAGGTTCGAAGATGTGGTGAAATCAAACCCCTCTTCACTCGGTAGATGTTTCTGGGATCATATTTTCAGAACATTTCCAGATAAAAGCAGGGAAAATCTAGTCAACTACTACTTCAATGTCTTTCTTTTCCAGCGCAGAAGATACCAGAATAGGCATACTAAAAATAAAATTGACAGTGACGATGAAGAATCGGAATTTGTACGACGGAGGAATGTTTTTGGACGTGAAACAAAGAAAACATGCAGAATGTAA 735 0.3986 MHPSMYDDHHLAITYNLRLRVKCDKRLLSGKSTFDEVSSDSSETHSSLDRCRTVQIPLGPTHQAEVFEWTGMTYESDSKWLGTKIWPSKTRIFQLLEKDLVGKGRQDSCGCHVEGSVECVQFHITEKRAKVKLELGVAFYQWNLHNAGEDVRRLWTQQEEKRFEDVVKSNPSSLGRCFWDHIFRTFPDKSRENLVNYYFNVFLFQRRRYQNRHTKNKIDSDDEESEFVRRRNVFGRETKKTCRM* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01105 244 Gene3D - 155 230 - -
Rops8g01105 244 Pfam Myb-like DNA-binding domain 154 201 IPR001005 -
Rops8g01105 244 SUPERFAMILY Homeodomain-like 154 203 IPR009057 -
Rops8g01105 244 CDD SANT 155 202 IPR001005 -
Rops8g01105 244 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01105 Rops-Chr8 23451005 23451739 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Rops8g01105 Myb_DNA-binding 5.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01105 - - gmx:102667655 329.331