Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01099 ATGAAAACCCAAACACCATTTACTGGTCGCCGGAAGCCAATCTCCGGCCACCTTAACTCGACAGAGAACCTTGGTCACTCGCCGCGAGATGACTCTTGCAAGGCCAGCACTGCCATCCGGAAATTAATCTCTGGCCAGAATCCGGTGGCAGCTGCCGCCACGTACTTCGCCGGAAATTTCTTTGGCTGCCGGACGCCGCCGGATACTGTGAACAGCCTCAGGAGCTTGGTGGATTCCGAGGAGTCCAAAGCTTCATTTGTCGTATCAGATGATTCAAGAGGTGGTGGTCAGAAAGGAAGAGGCTCAAATCGAGGTACCAGTGTCAATTCAAATAACTCAAACCAGGGAAAAGAGCTAAAAATTGTGAAATTCACCATGGAGGACATCTTCCAAGCCACAAGAAACTTCTCCCCTTCTTTCATGATTGGCCAAGGTGGAGTTGGAAAAGTCTACAAGGCCAAATTTCAAGATGGAACTGTTGTTGCTGTAAAGCGTGCTAAAAAGAGTCTACATGAGAAGAATTTAGGGGTGGAGTTCCAAAGAGAGATTGAAACACTGTCACAAGTTGAACATCTGAATTTGGTCAAGTTCTATGGATATTTGGAGAAAAGAGATGAAAGAATTCTTGTTGTGGAGTATGTTCAAAATGGAACCCTTAGAGAACATCTAGATTGCCTTCATGGAAACATTCTGGACTTTGCTGCTCGTCTAGACATTGCAGTTGATGTGGCTCATGCTATCACCTATCTTCATATGTATACAGATCATCCAATCATTCATAGAGACATAAAATCATCCAACATTCTTCTCACTGAAAATCTCAGAGCTAAGGTAGCTGACTTTGGTTTTTCTAGACAAGCACCTGACAGTGACTCTAGCATGTCCCATGTGTCCACCCAAGTTAAAGGAACAGCTGGCTACTTGGATCCTGAGTACATGATAACTTATCAACTAACTGAGAAGAGTGATGTTTATTCATTTGGAGTTTTGCTTGTTGAACTTGTCACAGGTAGACGTGCCATTGAACCAAAACTTGAACTCAGGGAGAGAGTAACCCCTAAATGGGCTATGAAGAGATTTATTGAGGGAGATGCCATCTCAGTTCTGGATCCAAGACTAGAGAACACTGCAGCAAATTCTATGGCCTTAGAAAAGATACTTAAACTAGCCTTACAGTGTTTGGCTCCTCGTAGACAAAGCAGGCCTAACATGGAGAGATGTGCTAAGATCCTTTGGATCATCCGCAAGGATTACAGGGAGATATCAGCTTCACACTTCAGATCATTTTCCTCTACTTCCCATAGGAGCTCTTTAATAGAAGAATGA 1326 0.4374 MKTQTPFTGRRKPISGHLNSTENLGHSPRDDSCKASTAIRKLISGQNPVAAAATYFAGNFFGCRTPPDTVNSLRSLVDSEESKASFVVSDDSRGGGQKGRGSNRGTSVNSNNSNQGKELKIVKFTMEDIFQATRNFSPSFMIGQGGVGKVYKAKFQDGTVVAVKRAKKSLHEKNLGVEFQREIETLSQVEHLNLVKFYGYLEKRDERILVVEYVQNGTLREHLDCLHGNILDFAARLDIAVDVAHAITYLHMYTDHPIIHRDIKSSNILLTENLRAKVADFGFSRQAPDSDSSMSHVSTQVKGTAGYLDPEYMITYQLTEKSDVYSFGVLLVELVTGRRAIEPKLELRERVTPKWAMKRFIEGDAISVLDPRLENTAANSMALEKILKLALQCLAPRRQSRPNMERCAKILWIIRKDYREISASHFRSFSSTSHRSSLIEE* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01099 441 CDD STKc_IRAK 142 411 - -
Rops8g01099 441 MobiDBLite consensus disorder prediction 99 114 - -
Rops8g01099 441 SUPERFAMILY Protein kinase-like (PK-like) 114 415 IPR011009 -
Rops8g01099 441 PANTHER OS01G0750732 PROTEIN 80 425 - -
Rops8g01099 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Rops8g01099 441 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 214 425 - -
Rops8g01099 441 MobiDBLite consensus disorder prediction 84 114 - -
Rops8g01099 441 MobiDBLite consensus disorder prediction 1 26 - -
Rops8g01099 441 SMART serkin_6 136 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01099 441 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 2 97 213 - -
Rops8g01099 441 ProSiteProfiles Protein kinase domain profile. 136 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01099 441 MobiDBLite consensus disorder prediction 1 32 - -
Rops8g01099 441 Pfam Protein kinase domain 141 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01099 441 Gene3D Transferase(Phosphotransferase) domain 1 214 433 - -
Rops8g01099 441 Gene3D Phosphorylase Kinase; domain 1 98 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01099 Rops-Chr8 23360493 23366592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01099 114 412 Receptor kinase-like Gene Family AT3G19300 40.803 2.20e-72 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Rops8g01099 Pkinase 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01099 - - gmx:100792034 586.645