Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01083 ATGCACCACTGGGTATCACGTAAACCCACACGTAGTCATGGACTCCCCAGCATACGATCAGCCATGTTCCGTCGAGCAACGACCCTTCTCGCCGCCAGATCGCGGTGGTTCTCCAGGGCGGATCTCACGGTGGCAGATTCATGCTTCGTGGAAACATGGAAGAAGGTGAGCCCCAACATGAACCCACCCAAGACACCTCTGTCATTCATGCAACCTCGCCCACCTACACCATCTTCGCTCCCTTCAAAGATCACTGTCAACTTCGTCCTCCCTTACGCTTCCCAACTCTCCGCCAAAGAGGTTGACATGGTCATAGTACCAGCAACAACTGGGCAGATGGGTGTTCTCCCTGGGCATGTAGCAACAATTGCTGAGTTGAAACCTGGAGTCCTATCGGTACACGAGGGGAATGAACAGGATAATGTTCCATCATTGGTCACCTCAAACCGCATGCACCCATGCAAACTCGTGTTGCACCCGGAAGAGAGGAGTTGTGCTTTGAACGACTATGGCCCAGTTGAAAGCTCTTCCATTCCATGCAACTGTTTCTTTCCTATCTACAACAGATCACCTTCTGTATCATCAGTTCTCAAAGGCAAAGCTACCATCTTCATTCAAAGAGTTGGGGCCAAGAGCTAG 639 0.5117 MHHWVSRKPTRSHGLPSIRSAMFRRATTLLAARSRWFSRADLTVADSCFVETWKKVSPNMNPPKTPLSFMQPRPPTPSSLPSKITVNFVLPYASQLSAKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNEQDNVPSLVTSNRMHPCKLVLHPEERSCALNDYGPVESSSIPCNCFFPIYNRSPSVSSVLKGKATIFIQRVGAKS* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01083 212 CDD F1-ATPase_delta 84 139 IPR001469 GO:0015986|GO:0045261|GO:0046933
Rops8g01083 212 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 85 140 IPR020546 GO:0015986
Rops8g01083 212 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 84 139 IPR036771 -
Rops8g01083 212 Gene3D - 74 148 IPR036771 -
Rops8g01083 212 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 47 139 IPR001469 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01083 Rops-Chr8 23035393 23036242 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01083 22 138 Primary Pumps ATPases AT5G47030 61.417 2.31e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01083 K02134 - tcc:18614544 184.111