Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01072 ATGAAGAGAATCTCCAAGGAGATAAAGATAAGTTATGAGGCAGCGCTTGTGGAAAATATTGCTGAACACATACGTAAAAAGCTGGTTCTTAAATTCCTCAGCACTTCTGTCTACACAGAGAACCTTGTTGGGATTGCTTTAAGGGTAGAGGAAGTGAACAAGCTCATGGGTGTGGGGTTGAAGGACGTTAGATTTATAGGCATATGGGGCATGGGTGGCATAGGCAAGACAACTACTGCTAGAACTGTCTATAAAACAATAAAAGGTGAATTTGATGTTACTTGCTTTCTTCCCAATGTTGGAGAGCTATTTGAGACAAATGGTTTGGTTCACAAACAAAAAGAACTTATTTCTCATCTGAATATAAGTAGGAGTGATTTTTATAATTTATATGATGGGAAACAGACAATACGAAACTCTTTGTGCAACAGGAAAGTTCTTATTCTTCTTGATGATGTAAGTGAAGCAAACCAATTGGAGAATTTGGCTGAGAACAAAGAATGGTTTGGTCCTGGAAGCAGAATAACGATCACAACCAGAGATAAACACCTGCCAAGGATAGATAGAGTGCATGGAATTTATGAGGTTGGATGCTTAGTCCAAAATGAAGCTCCTAAAGAGGACATTGATACTTTTGGTGATGCTTGTTGCTGCTGGTCGTTGTGGGTTGTTGTAGCTTTGATTCTGGTTGTTGTCTATTTGGTATTTGTTGGATAG 717 0.3877 MKRISKEIKISYEAALVENIAEHIRKKLVLKFLSTSVYTENLVGIALRVEEVNKLMGVGLKDVRFIGIWGMGGIGKTTTARTVYKTIKGEFDVTCFLPNVGELFETNGLVHKQKELISHLNISRSDFYNLYDGKQTIRNSLCNRKVLILLDDVSEANQLENLAENKEWFGPGSRITITTRDKHLPRIDRVHGIYEVGCLVQNEAPKEDIDTFGDACCCWSLWVVVALILVVVYLVFVG* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01072 238 Gene3D - 29 189 IPR027417 -
Rops8g01072 238 Pfam NB-ARC domain 53 203 IPR002182 GO:0043531
Rops8g01072 238 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 204 IPR027417 -
Rops8g01072 238 PRINTS Disease resistance protein signature 140 154 - -
Rops8g01072 238 PRINTS Disease resistance protein signature 65 80 - -
Rops8g01072 238 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 185 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01072 Rops-Chr8 22822609 22826455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01072 43 204 WRKY Transcription Factor Family AT5G45050 36.420 2.19e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01072 - - aprc:113861574 239.195