Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01071 ATGAGCGGTGCAACCATGGGTTTCTATGATTACATGATTCGCAACAAGGGTGAACTTGATGAGAGGATATTCATTAATGAGGACGACGGCCTGCTGGCTTCAGGAAGCTTGTCTGGAGGTTCTGTTTCTGCAGGTGGTGTAAAGAGGAAATCCGATTCAATGGAATCTCCTGCTAAGACCATTACAGCCACCCCTGTAACCACGGCAATGACTACTGCAAAGTGGCTTCGTACTGTCATTTCTCCACTTGCATCAAAGCCCTCACCAGAGCTAGAGAGATTCTTGACATCATGTGACGGGGATGTTGCAAGTGATGTGCTGCGCAGAGCGCAAATTATATTACAGGCTATATTTCCTAGTGGCCCTCTTGGGGAGCGAGTGAATTCCATATTGCAAAGAAGAAGTGACCCACTTCCACGGATGAGCTAG 429 0.4755 MSGATMGFYDYMIRNKGELDERIFINEDDGLLASGSLSGGSVSAGGVKRKSDSMESPAKTITATPVTTAMTTAKWLRTVISPLASKPSPELERFLTSCDGDVASDVLRRAQIILQAIFPSGPLGERVNSILQRRSDPLPRMS* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01071 142 Gene3D - 67 135 - -
Rops8g01071 142 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 9 125 IPR028309 GO:0006357|GO:0051726
Rops8g01071 142 Pfam Retinoblastoma-associated protein A domain 64 118 IPR002720 GO:0005634|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01071 Rops-Chr8 22800996 22801500 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01071 8 127 Core Cell Cycle Gene Families AT3G12280 55.245 2.22e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01071 K04681 - gmx:100777805 162.54