Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01070 ATGGCCCAGCGACCACCCATCACGGTTGCACTTTCAGCACCTCATTCAGTTGTTCCCATTGTCTTTGATGATATCTCCCCTGAGAAGGCGCAAGCTATCATGTTGTTGGCTGGGAATGGCTTATCTGCAGCTTCTAACATGGCACAGCCCAAAGTTCAGGCACCCAGCTTGAAGTTGGCAGCAGGTGATGGTGTACCTGTGAGTCAACCCATAAATATACCACCCTCCTCTGGTCTTTCGGGTCCCTTGTCCGTTTCTTCACATATCAGTGCACAGTCGGGAAGTGGCTCAAGCAGCGATGATCAACTTCCGGCAGCTAAAACATCTGGAGGTCCCATCACTCCTGTTAGCAAAGTGAAGACTCCAAAAGTAGTCAATGCAACCACCATGTTTCAGTCAGCTGTACCGCAGGCTCGCAAAGCATCATTGGCTCGATTTTTGGAGAAGCGCAAGGAAAGGGTGATGAATACAGCACCATATAACCTCAACAAGAAGTCTGTGGATGTACCACTGCAGGATGCAATGGTTGCTGACATCTCTGCAACTACTGGTACCAATACTCCTTCAACACCCACATGA 579 0.4922 MAQRPPITVALSAPHSVVPIVFDDISPEKAQAIMLLAGNGLSAASNMAQPKVQAPSLKLAAGDGVPVSQPINIPPSSGLSGPLSVSSHISAQSGSGSSSDDQLPAAKTSGGPITPVSKVKTPKVVNATTMFQSAVPQARKASLARFLEKRKERVMNTAPYNLNKKSVDVPLQDAMVADISATTGTNTPSTPT* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01070 192 MobiDBLite consensus disorder prediction 70 118 - -
Rops8g01070 192 Pfam Jas motif 136 160 IPR018467 -
Rops8g01070 192 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 21 165 IPR040390 -
Rops8g01070 192 MobiDBLite consensus disorder prediction 70 105 - -
Rops8g01070 192 ProSiteProfiles Tify domain profile. 4 39 IPR010399 -
Rops8g01070 192 Pfam tify domain 21 38 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01070 Rops-Chr8 22800238 22800816 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01070 20 166 Tify Gene Family AT3G17860 40.252 3.50e-18 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Rops8g01070 Jas_motif 3.7e-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01070 K13464 - gmx:100799314 204.912