Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01041 ATGTCTTTTGAGTCAGCCCCTGCTTCAGCTGATCACAACAACATCAAGGGAGTTCTCACTCATGGTGGACGCTATGTTCAGTACAATATCTATGGCAACCTCTTCGAGGTGTCAAGGAAGTATGTCCCTCCTATTCGCCCTGTGGGAAGAGGAGCTTACGGTATTGTTTGTGCTGCTGTAAATGCGGAGACACGGGAAGAAGTTGCCATTAAGAAGGTTGGCAATGCATTTGACAACAGAATAGATGCCAAAAGGACCTTACGAGAAATTAAACTTCTTCGGCACATGGATCATGAAAATGTGATAGTCCTTAAAGACATTATACGACCACCACAGAGGGAAAACTTCAATGATGTATACATCGTTTATGAGTTAATGGATACCGATTTGCATCAAATAATTCGTTCCAATCAACCATTGAATGATGATCATTGTCGGTATTTTCTGTATCAGTTGTTACGAGGACTCAGATATGTACACTCAGCAAGTGTTCTGCACCGTGATCTAAAGCCTAGCAACTTGCTACTGAATGCCAATTGTGATCTTAAGATTGGAGACTTTGGTCTAGCTAGAACTACATCTGAAACTGATTTCATGACTGAATATGTGGTTACTCGATGGTACCGAGCTCCAGAATTGCTCCTAAATTGTTCAGAATATACTGCAGCCATTGATATATGGTCTGTTGGTTGCATCCTTGGTGAAATCATGACTAGACAACCCCTATTTCCTGGGAAAGATTATGTTCATCAGCTCAGATTGATCACAGAGCTCATAGGTTCACCTGATGACACCAGCCTTGGATTTTTACGAAGTGATAATGCTCGTAGATATGTAAGACAACTTCCACAATATCCAAGGCAACAATTTGCTGCAAGATTTCCCAACATGTCTCCTGGTGCAGTTGATTTGTTAGAGAAGATGCTTGTCTTTGATCCAAACAGGCGCATTACAGTTGATGAGGCTCTTTGCCACCCATACTTGGCACCTATCCATGATATTAATGAGGAACCTGTTTGCCCTAGACCTTTCAGTTTTGATTTTGAACAACCGTCTTTCAATGAAGAAGATATCAAGGAACTCATCTGGAGAGAATCTGTGGAGTTCAATCCTGATCCACCTATTTATTGA 1131 0.4138 MSFESAPASADHNNIKGVLTHGGRYVQYNIYGNLFEVSRKYVPPIRPVGRGAYGIVCAAVNAETREEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHENVIVLKDIIRPPQRENFNDVYIVYELMDTDLHQIIRSNQPLNDDHCRYFLYQLLRGLRYVHSASVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDDTSLGFLRSDNARRYVRQLPQYPRQQFAARFPNMSPGAVDLLEKMLVFDPNRRITVDEALCHPYLAPIHDINEEPVCPRPFSFDFEQPSFNEEDIKELIWRESVEFNPDPPIY* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01041 376 Pfam Protein kinase domain 46 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01041 376 SUPERFAMILY Protein kinase-like (PK-like) 45 335 IPR011009 -
Rops8g01041 376 CDD STKc_TEY_MAPK 35 371 - -
Rops8g01041 376 Gene3D Transferase(Phosphotransferase) domain 1 126 355 - -
Rops8g01041 376 SMART serkin_6 42 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01041 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Rops8g01041 376 FunFam Mitogen-activated protein kinase 126 355 - -
Rops8g01041 376 ProSitePatterns Protein kinases ATP-binding region signature. 48 72 IPR017441 GO:0005524
Rops8g01041 376 FunFam Mitogen-activated protein kinase 27 136 - -
Rops8g01041 376 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 40 329 - -
Rops8g01041 376 ProSiteProfiles Protein kinase domain profile. 42 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01041 376 ProSitePatterns MAP kinase signature. 77 180 IPR003527 GO:0004707|GO:0005524|GO:0006468
Rops8g01041 376 Gene3D Phosphorylase Kinase; domain 1 25 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01041 Rops-Chr8 22048018 22056166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01041 1 371 MAP Kinase Gene Family AT4G01370 87.634 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Rops8g01041 Pkinase 7.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01041 K20600 - gmx:100815697 722.235