Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01038 ATGTCAATCTTCGATGGAGCTTTCATGAACACACAACTTTCAAAACACACTTCAATCTTCGGTCTTCGTCTTTGGGTTCTCATCGGAATCCTCATCGGCGTTCTCATCGTTTTCACCCTCTTCCTCATTTCTCTCTGCCTCGTCTCTCGACGGCGTCACCGCCGCTCCGGCGTAGTCGCCGGCGAATACAAAGTTGCCGGAGGTCCTGCACCGTACAAGGAAATCCAGGAGATCGTGCACCTTCCGGGACCCCACATGTTCCGGAGGCCGGCGCCTTCGCCGGCGAAGGTGCCGGAGATCAAGGTGGACATAGGCAAGGCGGAGCACCGGGTTGTGGTGCAGCCTGATAAGGTTTCAAGCGAGGAGAGCAAGGGAACAGTGATGAGTGGGTGTGAAACGACGTCGTCTTTTGGGAGTGTTAGTGTTGGTGGAATTGGACCTGAAGTGTCACATCTTGGGTGGGGAAGATGGTTCACTCTGAGGGAATTGGAGGATGCAACTGATGGATTGTGTGAGGAAAATGTGGTTGGTGAAGGTGGCTATGGAATTGTTTATCATGGGGTGCTCAATGATGGTACCAAAGTTGCTGTCAAGAACCTGTTGAATAACAAGGGCCAAGCTGAGAAAGAATTTAAAGTAGAGGTAGAAGCAATTGGTCGAGTTCGACACAAAAATCTTGTTAGGTTGCTTGGATACTGTGTTGAGGGTGCCTACAGGATGCTTGTATATGAATATATTGACAATGGCAATCTAGAACAGTGGCTGCATGGGGATGTTGGAGATATAAGCCCTTTGACATGGGATATACGCATGAACATTATTTTGGGAACTGCAAGAGGATTGGCCTATCTTCATGAGGGTCTCGAACCGAAGGTTGTTCATCGAGATGTGAAATCAAGCAACATACTCCTTGATCGCCAATGGAACTCCAAGGTTTCTGATTTTGGGCTTGCTAAGCTTTTGTGTTCTGAGAATAGTTATGTCACAACTCGAGTTATGGGGACATTTGGTTATGTTGCACCAGAATATGCCTGCACTGGAATGCTGACTGAGAAGAGTGATGTTTATAGCTTTGGGATACTCATCATGGAGATTATTACTGGTAGAAGTCCTGTTGATTATGGTAGACCACAAGGAGAGGTTAATTTAATAGATTGGTTGAAGACTATGGTTGGGAATAGAAAATCTGAGGAAGTAGTTGATCCTAAGGTCCCTGAGATGCCATCTTCAAAGGCTCTCAAACGTGCTTTGTTGATTGCTCTTAGATGTGTTGATCCTGATGCAACAAAGAGGCCTAAAATGGGACATGTGATCCACATGCTTGAAGCAGATGACCTATTATTCCACAATGAACCCAGAACTGGGGGAGAATCTTCACGTTCCCATCGTGATTATCAACAAGAGCATAAGGACTCTAATTTAGATAAGAGGACAGATGGAGGGATCACTAATCAAAGTGAAGATGTTAGTGGTAGTAACCATCATCAGCCTAATAGGAGGAGATGA 1506 0.4602 MSIFDGAFMNTQLSKHTSIFGLRLWVLIGILIGVLIVFTLFLISLCLVSRRRHRRSGVVAGEYKVAGGPAPYKEIQEIVHLPGPHMFRRPAPSPAKVPEIKVDIGKAEHRVVVQPDKVSSEESKGTVMSGCETTSSFGSVSVGGIGPEVSHLGWGRWFTLRELEDATDGLCEENVVGEGGYGIVYHGVLNDGTKVAVKNLLNNKGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYIDNGNLEQWLHGDVGDISPLTWDIRMNIILGTARGLAYLHEGLEPKVVHRDVKSSNILLDRQWNSKVSDFGLAKLLCSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYGRPQGEVNLIDWLKTMVGNRKSEEVVDPKVPEMPSSKALKRALLIALRCVDPDATKRPKMGHVIHMLEADDLLFHNEPRTGGESSRSHRDYQQEHKDSNLDKRTDGGITNQSEDVSGSNHHQPNRRR* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01038 501 MobiDBLite consensus disorder prediction 449 501 - -
Rops8g01038 501 SMART serkin_6 170 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01038 501 MobiDBLite consensus disorder prediction 478 492 - -
Rops8g01038 501 FunFam Probable serine/threonine-protein kinase At1g01540 150 245 - -
Rops8g01038 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Rops8g01038 501 PANTHER OS01G0323000 PROTEIN 7 467 - -
Rops8g01038 501 SUPERFAMILY Protein kinase-like (PK-like) 149 442 IPR011009 -
Rops8g01038 501 Gene3D Phosphorylase Kinase; domain 1 147 245 - -
Rops8g01038 501 MobiDBLite consensus disorder prediction 449 477 - -
Rops8g01038 501 Pfam Protein kinase domain 173 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01038 501 ProSiteProfiles Protein kinase domain profile. 170 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01038 501 ProSitePatterns Protein kinases ATP-binding region signature. 176 198 IPR017441 GO:0005524
Rops8g01038 501 FunFam Putative receptor-like serine/threonine-protein kinase 246 455 - -
Rops8g01038 501 Gene3D Transferase(Phosphotransferase) domain 1 246 451 - -
Rops8g01038 501 CDD STKc_IRAK 176 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01038 Rops-Chr8 22022869 22026983 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01038 139 442 Receptor kinase-like Gene Family AT4G02010 45.779 4.79e-92 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Rops8g01038 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01038 - - gmx:100817295 787.719