Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01027 ATGGGAGTAATAGCACTGTCGGCTAAACCAGGATTCACATGCTTCCCCAACACTATGGAAAATGCCAACACCGATGCAAAGCATGTGGGTTTGGAAACATTGGCATACTTGGGTCTCATCTACTATGTCTTCATCAATGGCTTGCAGATGAACTTGGAAGTTGTCTTACGAGCAGGAAAGAAGGCAACAACCATTGTTGTTGCTGACACCTTGATTCTAATGGAATTGGGAGCTCGAATATATTTCTTGTTTCAAAATTTCAGTGTGATCCATAATCAACTTTCACATTTCAATGGACCTGCTTATATAATATGGACCTTAGTTGTTAGTGTCACAAGTTTTCCCATCATTGCTCACATCCTTGCTGACTTAAAACTCCTTTGCACTGGGCTTGGTAGAGTGGCATTAACATCAGCTACTGTTAATGACTTCTATAATGGGCTATGTTTGTGCTCTTGGTTCCATTGGCTATTAATGATTTTGAGTCACGAGGCCTTTACAATTTTGGTGTACAGTATTCTTGTTATGACTGCAATGGTGTCTCCTATGATCAATGGCATCTACAGGCCAAGAAAGAGACATGACCAAAATAAGCTAAGGACTATAGAAAACTTGAAGGCAGATTCAGAGATCAAAGTTATGGTTTGTGTACACAATGCTCGCCATGCCAGTGGAATGATCAACATCCTTGGACCTTGCAATGGCACTAACGTGTCCCCTTTACGTGTTTTTGCTCTTCAACTTGCTGAGCTCAAAGGACGTGCCACCGCCCTTCTAGTTTCCCACATAGAGCAATCCACTGCCCAAAAGTGTGGAACACTGGAACATACCAACCCATTAGAAACAAAATCGGAAAGCATCACCGATATCTTTGTAGATTATGCGTCTAACCATGAACACGTCATTGTGGAGAGCCTTATTGCTTTGTCATCCTACACAACCATTCATAAGGACATATATAATAGCCTCAGAGAAACAAACATCATTGGTTCTCCTCCCTTTTCACAAACAATCAAGTGCAGAAGGTACTCTGGAGATAACCAATAA 1047 0.4136 MGVIALSAKPGFTCFPNTMENANTDAKHVGLETLAYLGLIYYVFINGLQMNLEVVLRAGKKATTIVVADTLILMELGARIYFLFQNFSVIHNQLSHFNGPAYIIWTLVVSVTSFPIIAHILADLKLLCTGLGRVALTSATVNDFYNGLCLCSWFHWLLMILSHEAFTILVYSILVMTAMVSPMINGIYRPRKRHDQNKLRTIENLKADSEIKVMVCVHNARHASGMINILGPCNGTNVSPLRVFALQLAELKGRATALLVSHIEQSTAQKCGTLEHTNPLETKSESITDIFVDYASNHEHVIVESLIALSSYTTIHKDIYNSLRETNIIGSPPFSQTIKCRRYSGDNQ* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01027 348 Gene3D - 11 159 IPR038770 -
Rops8g01027 348 Pfam Sodium/hydrogen exchanger family 28 145 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Rops8g01027 348 PANTHER CATION/H + ANTIPORTER 26 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01027 Rops-Chr8 21662870 21665539 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01027 160 319 Antiporter Super Family AT2G13620 35.000 2.11e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01027 - - mtr:11442852 194.126