Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01026 ATGAGCGAATCGGTGAAGAAAGTTTTGGATGTAGCATTTAAGTTGTGGAAGAAAATCGATCGAGATGGAATGGTCCCCAAAGGCTTCGTCGCCACACCTTCCTTCGATGAAGGACCCCTCGAAACCGAAGACGAGATTGCAGCGGCATACAGTTATGTGATGGACTTGAAGGTGAAGAAGGACACTGGGTTTGGTTCGGGTGCTAAGAAAGAGAAGATTAGGGATGGGTTTGAAGAGAGGGTGGTTCAGTGCAATTCCAGTCAGGTTGCAATTAAGTGTTTTCAGTTCTACTATGGAAAGAAGAATGATGATCCTTACAGTTCTACTTATATTGAGGGTGAGGTGAAAAGAACTGGTTTTGAATTGAATTCTCAGGATGCCTCAGACAATAGCACAGACTCACTCAGGAGGAATGGATTTCCCAGTTTGTCCCAAAGACCCAGCAACCTGAGAGTATTTACTGTATCTGAACTGAAATCAGCCACAAAGAATTTTAGTCGCTCTATTATGCTTGGAGAGGGTGGGTTCGGGTGTGTCTACAAGGGATTCATCAAGAATGTAGATGATCCTTCCCAAAGAATTGAAGTTGCTGTTAAACAACTTGGTAGAAGAGGAATTCAGGGGCATAAGGAATGGGTACCAAAGGTGAATGTTCTTGGAATTGTTGAGCATCCCAATCTTGTGAAACTAGAGGGCTACTATGCTGATAATGATGAAAGAGGAATCCAGTGGCTTCTGATTTATGAATATATGCCCAATGGAAGTGTGGATCATCACTTACCCCCACAATCAGAAACTCCTCTTCCATGGAGTAGGAGATTGAAAATAGCCCAAGATGCAGCTCGTGGCTTAACATACTTGCATGAGGAAATGGATTTTCAAGTATAG 888 0.4302 MSESVKKVLDVAFKLWKKIDRDGMVPKGFVATPSFDEGPLETEDEIAAAYSYVMDLKVKKDTGFGSGAKKEKIRDGFEERVVQCNSSQVAIKCFQFYYGKKNDDPYSSTYIEGEVKRTGFELNSQDASDNSTDSLRRNGFPSLSQRPSNLRVFTVSELKSATKNFSRSIMLGEGGFGCVYKGFIKNVDDPSQRIEVAVKQLGRRGIQGHKEWVPKVNVLGIVEHPNLVKLEGYYADNDERGIQWLLIYEYMPNGSVDHHLPPQSETPLPWSRRLKIAQDAARGLTYLHEEMDFQV* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01026 295 Gene3D Transferase(Phosphotransferase) domain 1 252 293 - -
Rops8g01026 295 MobiDBLite consensus disorder prediction 121 140 - -
Rops8g01026 295 PANTHER OS01G0588500 PROTEIN-RELATED 128 290 - -
Rops8g01026 295 ProSiteProfiles Protein kinase domain profile. 165 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01026 295 SUPERFAMILY Protein kinase-like (PK-like) 140 289 IPR011009 -
Rops8g01026 295 ProSitePatterns Protein kinases ATP-binding region signature. 171 199 IPR017441 GO:0005524
Rops8g01026 295 Pfam Protein tyrosine and serine/threonine kinase 170 290 IPR001245 GO:0004672|GO:0006468
Rops8g01026 295 Gene3D Phosphorylase Kinase; domain 1 145 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01026 Rops-Chr8 21658965 21661107 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01026 90 292 Glycoside Hydrolase AT3G07070 38.462 4.21e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Rops8g01026 PK_Tyr_Ser-Thr 4.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01026 - - gmx:100305438 345.895