Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01025 ATGGGAGAAACAACACTGCCGGCTAAACCAGGGTTCATATGCTTCCGCACCACTGTGGAAAATCCCAACACCGTATGGAACAGTGAAAATGTCCTACTAGAGAACCTTCCTAATCTTTTCATGCAACTTTTGTTGCTTGCCTTTTTCACTCGTTTTTTCTACTCAATCCTAAGACCCTTCCATCAACCTCATTTTGTTGCTGAGATTGTTGCAGCTCTCGTGCTAAATATACAAGTAAATGGACAATTGGTTTTTCATGAATGGGATGCAAAGCATGTCCATGGTTTGGAAACCTTGGCACATGTGGGTCTCATCTACTATGTCTTTATCAATGGCTTGCAGATGAACTTGGAAGTTGTCTTACGAGCAGGAAAGAAGGCAACAACCATTGCTGTTGCTGGCACCTTGATTCCAATGGCATTGGGAGCTGGAATATATTTCTTGTTTCAAAATTTTAGTGTGATCCATGATCAACTTTCACATTTCAATGGACCTGAAGCTTATATAATGTGGACCTTAGTTGTTAGTGTCACAAGTTTTCCCATCCTTGCTCACATCCTTGCTGACTTAAAACTCCTCTACACTGGGCTTGGTAGAGTGGCATTAACATCAGCTACTGTTAATGACTTCTATAATAGGGCTATGTTTGTGCTCTTGGTTCCATTGGCTATTAATGGTACAAAAGGCTTTTATTCAGTGATGAGCACCTTAGTTTTTATCCTTTCTTGCTTCTTTGTGCTACGCCCTTCCCTCAAGAGGATATTGCTCCAGAAGACCAATCAGAATGAAAAGGAAAATTACATGTTATCATATCTGATCATGGGTGTCTTTGCTTGTGCCATTGTTACCGAATTGCTTGGTACAAACTCTGTTGTTGGGGCTTTGGTGTATGGATTGATCCTCCCTCGTGGAAGATTCACTGACATGTTGATAGAGAAGTCAGATGATATCACATCTGGGTATCTGGCGCCTTTTTTCATTTCTATCATTGGTATAAAAGCCAACATACAAGCTATTAAGTTTGAAGATTACTTTCTAATGGTAGTAATCATACTCTTGTTAAGCTGCATGAAGATTGTAAGCACTATAATAGCCACTCGCTTCTATGGAATGCCTCTCCAAGATGGCATGGCTCTTGGAGTGCTTATGAACACCAAAGGCGTCTTACCATTCATAATACTAAACATTGCATGGAATAAAAAGATTTTGAGTCACGAGGCCTTTACAATTTTGGTGTACAGTATTCTTGTTATGACTGCAATAGTGTCTCCTATGATCAATGGCATCTACAGGCCAAGAAAGAGACATGACCAAAATAAGCTAAGGACTATAGAAAACTTGAAGGCAGATTCAGAGATCAAAGTTATGGTTTGTGTACACAATGCTCGCCATGCCAGTGGAATGATCAACATCCTTGGACCTTGCAATGGCACTGACGTGTCCCCTTTACGTGTTTTTGCTCTTCAACTTGCTGAGCTCAAAGGACGTGCCACCGCCCTTCTAGTTTCCCACATAGAGCAATCCACTGCCCAAAAGTGTGAAACACTGGAACATACCAACCCATTAGAAACAAAATCGGAAAGCATCACCGATATCTTTGTAGATTATGCGTCTAACCATGAACACGTCATTGTGGAGAGCCTTATTGCTTTGTCATCCTACACAACCATTCATAAGGACATATATAATTTAGCCTCAGAGAAACAAGCATCATTGGTTCTCCTCCCTTTTCACAAACAATCAAGTGCAGAAGGTACTCTAGAGATAACCAATAACAGATTCGAAGAAATAAACCAAAATGTAATGCAAGATGCACCTTGTTCTGTGGGAATCTTTGTTGATCGTGGTCATTGGGACAAGACCTACTTGCGTGCTCTTATGCTCTTCATTGGAGGGCCTGATGATCGTGAAGCCTTAGCTATTGCTTGGAGAATGTCAAAGCATCCAACAACACGACTCACCATGGTGAGGATTATTTTGTGTGGAAAGGCTGCAGAAGGAGTAGATACATCAACAAAAAATGATGTTCAAGAAGGGATATTATCTGCGGTAATAGACAGTGGAAAGGAAAAAGAGTTGGATGAAGAGTATGTAGGTTTATTTAGACTCAAGGCAGTGAACAATGAAGACTCCATAACTTATAAAGAGATGAAAGTGCATAGTGGTGATGATATTACTGAAGTACTTAATCAATTGGACAAAGGAGGTTATGATTTATACATTTTAGGACAGGGAAAAGGAAGGAACTCCTTGTTATTGGAAAATTTATTAGAATGGGCTGATTACCCTGAGCTTGGAGTTATTGGGGACATGTTGGCATCAAATAGTTTTGGTTCAAGCTCATCAATACTTGTTGTGCAACAATATGGGTTTGGGGGAACGGGCTTTAAGACCAATTGTAACTCTCAGAAATCAAATGATGATGATATTGAGTCGTTTTTTTCCAAACAAGGAGTGACATAA 2463 0.4011 MGETTLPAKPGFICFRTTVENPNTVWNSENVLLENLPNLFMQLLLLAFFTRFFYSILRPFHQPHFVAEIVAALVLNIQVNGQLVFHEWDAKHVHGLETLAHVGLIYYVFINGLQMNLEVVLRAGKKATTIAVAGTLIPMALGAGIYFLFQNFSVIHDQLSHFNGPEAYIMWTLVVSVTSFPILAHILADLKLLYTGLGRVALTSATVNDFYNRAMFVLLVPLAINGTKGFYSVMSTLVFILSCFFVLRPSLKRILLQKTNQNEKENYMLSYLIMGVFACAIVTELLGTNSVVGALVYGLILPRGRFTDMLIEKSDDITSGYLAPFFISIIGIKANIQAIKFEDYFLMVVIILLLSCMKIVSTIIATRFYGMPLQDGMALGVLMNTKGVLPFIILNIAWNKKILSHEAFTILVYSILVMTAIVSPMINGIYRPRKRHDQNKLRTIENLKADSEIKVMVCVHNARHASGMINILGPCNGTDVSPLRVFALQLAELKGRATALLVSHIEQSTAQKCETLEHTNPLETKSESITDIFVDYASNHEHVIVESLIALSSYTTIHKDIYNLASEKQASLVLLPFHKQSSAEGTLEITNNRFEEINQNVMQDAPCSVGIFVDRGHWDKTYLRALMLFIGGPDDREALAIAWRMSKHPTTRLTMVRIILCGKAAEGVDTSTKNDVQEGILSAVIDSGKEKELDEEYVGLFRLKAVNNEDSITYKEMKVHSGDDITEVLNQLDKGGYDLYILGQGKGRNSLLLENLLEWADYPELGVIGDMLASNSFGSSSSILVVQQYGFGGTGFKTNCNSQKSNDDDIESFFSKQGVT* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01025 820 Pfam Sodium/hydrogen exchanger family 44 425 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Rops8g01025 820 Gene3D - 37 440 IPR038770 -
Rops8g01025 820 PANTHER CATION/H + ANTIPORTER 23 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01025 Rops-Chr8 21653322 21656576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01025 13 789 Antiporter Super Family AT2G13620 38.209 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01025 - - mtr:11442852 934.865