Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01010 ATGGAGCCTAACTTTGTGTTTCCACTTCTATTCATGTTCCTCATTACTCCTTGGTTTGTATTTGTTCTTCATGGCTATGCTGAGAGTTCCACATATATAGTCCATATGGACAAATCCCTCTTTCCTCATATCTTCACAACCCATCATGATTGGTTTAAATCCACCATTGATTCCATAAAATCAGCTAAAGTTGATGACCCATCAAAGAAATCACAGAAACTAGTGTACACCTATGATCATGCCATGTGTGGCTTTAGTGCAGTGTTATCTTCAAACGAGTTAGAGAGTGTTAAGAAGGTCCATGGCTTTGTTGCAGCATACCCAGATAGAAGTGTCACCATTGACACCACTCACACCTTTGAATTTCTCTCCTTAGATTCTCCCACTGGCCTGTGGCATGCTTCAAATTTTGGAGAAGATGTCATTGTTGGTGTTATTGACTCTGGTGTGTGGCCTGAGAGTGAAAGCTTTAAAGATGATGGCATGACCAAGAAAATACCAAACAAATGGAAAGGAACATGTGAGGTTGGGCAAGAATTTAACTCCTCAAAGTGCAACTTCAAACTGATTGGAGCTAGATATTTCAACAAGGGTGTGATTGCTGCACAGCCAAAGGTTAGAATCAGCATGAACTCAGCCAGAGACACTGAGGGTCATGGGACTCACACATCATCTACTATTGCAGGAAACTATGTCAATGGAGCCTCTTATTTTGGCTATGCTAAAGGGGTAGCTAGAGGCATTGCTCCAAGAGCTAGGCTTGCCATGTACAAGGTCCTTTGGGAAGAGGGGCGTCAATCTTCTGATGTTTTGGCTGGGATGGACCAAGCAATTGCTGATGGGGTTGATGTGATTTCCATTTCAATGGGTTTTGATGATGTTCCACTTTATGAGGACCCTATAGCAATAGCTTCATTTGCAGCAATGGAAAAAGGGGTGGTGGTTTCATCTTCTGCAGGTAACTTAGGTCCTGATCTTGGAACCTTGCACAATGGAATCCCTTGGATCCTAACCGTGGCAGCAGGCACCATAGATCGTACATTTGGAAGTCTCATTCTTGGAAATGGCCAAACCATTATAGGTTGGACCTTGTTTCCAGCAAATGCCATAGTGGAAAATTTTCCACTTGTCTACAATAAGACTCTGTCATCATGCAACTCAGTGAAGCTGTTATCTGAAGTGACCACACCAGTGATCATTCTGTGTGACTCAAAGTCAGAATCTGTGTTTGTCCAAACCAGTTCTATTACCACAGCCAACGTTGCAGGGGCAGTGTTTATCTCTGATAATCCTGAATTAATAGAAACAGGATTTATCTTCTCTCCAAGTATTGTAATCAGTCCACAGGATGCACCAACTTTGATGAAGTATGCAAAAAGTGATAACAAGCCTACAGCCAGCATCAAATTTCAGCAAACATTTGTTGGAATAAAGCCAACACCAATTGCTGCTTATTACACTTCAAGAGGTCCTTCACCTAGCTATCCTGGGGTGTTAAAGCCTGACATAATGGCACCAGGTACTAGTGTTCTTGCTGCTTATGTTCCTAATAGATCAGCTGCTAAAATTGGCAAAAATGTTCACTTATCCAGTGACTACAATTTTCTATCTGGAACATCCATGGCTTGCCCTCATGCTTCTGGTGTTGCTGCTCTTTTGAAGGCTGCACATCCAGAATGGAGTGCTGCTGCTATAAGGTCTGCACTAGTAACAACAGCTAGTCCTTTGGATAATACTCAAAGTCCAATTAAGGATAATGGTCATCCATTTCAATATGCTTCCCCTCTTGCAATTGGAGCTGGTGAAATTGATCCTAATAGAGCAATGGATCCAGGTTTGATATATGATGCCACTCCACAGGACTATGTTAATCTACTTTGTGCTTTGGAGTATACACAGAAGCAAATCCTAACCATTACAAGATCAACCTCCTATAGCTGTGAAAACCCATCATTGGATCTTAATTACCCTTCATTTATTGCTTTCTACAACAACAAAACAAGATCAGTAGTCCACAAGTTTAGGAGGACTGTGACCAATGTTGGAGATGGTGCTGCTACATACAGAGCTAAGGTGACACAACCTAAGGGCTCCATGGTGACAGTGACACCTGAGATGTTATCATTCAGATATAAAAATGAGAAGCAGAGCTACTATATGATCATAAAGTATGTCAAGTACAAGAAGGAAAATATCTCATTTGGGGATCTTGTTTGGATTGAAGATGGTGGAACACACACTGTTAGGAGCCCTATTGTAGTGGCACCAAGTGGAATTGTATGA 2283 0.4166 MEPNFVFPLLFMFLITPWFVFVLHGYAESSTYIVHMDKSLFPHIFTTHHDWFKSTIDSIKSAKVDDPSKKSQKLVYTYDHAMCGFSAVLSSNELESVKKVHGFVAAYPDRSVTIDTTHTFEFLSLDSPTGLWHASNFGEDVIVGVIDSGVWPESESFKDDGMTKKIPNKWKGTCEVGQEFNSSKCNFKLIGARYFNKGVIAAQPKVRISMNSARDTEGHGTHTSSTIAGNYVNGASYFGYAKGVARGIAPRARLAMYKVLWEEGRQSSDVLAGMDQAIADGVDVISISMGFDDVPLYEDPIAIASFAAMEKGVVVSSSAGNLGPDLGTLHNGIPWILTVAAGTIDRTFGSLILGNGQTIIGWTLFPANAIVENFPLVYNKTLSSCNSVKLLSEVTTPVIILCDSKSESVFVQTSSITTANVAGAVFISDNPELIETGFIFSPSIVISPQDAPTLMKYAKSDNKPTASIKFQQTFVGIKPTPIAAYYTSRGPSPSYPGVLKPDIMAPGTSVLAAYVPNRSAAKIGKNVHLSSDYNFLSGTSMACPHASGVAALLKAAHPEWSAAAIRSALVTTASPLDNTQSPIKDNGHPFQYASPLAIGAGEIDPNRAMDPGLIYDATPQDYVNLLCALEYTQKQILTITRSTSYSCENPSLDLNYPSFIAFYNNKTRSVVHKFRRTVTNVGDGAATYRAKVTQPKGSMVTVTPEMLSFRYKNEKQSYYMIIKYVKYKKENISFGDLVWIEDGGTHTVRSPIVVAPSGIV* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01010 760 Pfam Fibronectin type-III domain 653 754 IPR041469 -
Rops8g01010 760 SUPERFAMILY Subtilisin-like 115 613 IPR036852 GO:0004252|GO:0006508
Rops8g01010 760 Pfam Peptidase inhibitor I9 31 114 IPR010259 -
Rops8g01010 760 CDD Peptidases_S8_3 112 574 IPR034197 -
Rops8g01010 760 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 114 IPR037045 -
Rops8g01010 760 Gene3D - 626 756 - -
Rops8g01010 760 FunFam Subtilisin-like protease SBT1.5 140 353 - -
Rops8g01010 760 Gene3D Peptidase S8/S53 domain 140 622 IPR036852 GO:0004252|GO:0006508
Rops8g01010 760 ProSiteProfiles Serine proteases, subtilase domain profile. 119 609 - -
Rops8g01010 760 Pfam Subtilase family 138 577 IPR000209 GO:0006508|GO:0008236
Rops8g01010 760 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 754 IPR045051 -
Rops8g01010 760 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Rops8g01010 760 PRINTS Subtilisin serine protease family (S8) signature 537 553 IPR015500 -
Rops8g01010 760 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Rops8g01010 760 FunFam Subtilisin-like protease SBT1.9 22 115 - -
Rops8g01010 760 CDD PA_subtilisin_like 350 468 - -
Rops8g01010 760 ProSitePatterns Serine proteases, subtilase family, serine active site. 538 548 IPR023828 -
Rops8g01010 760 Gene3D - 345 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01010 Rops-Chr8 21291123 21293551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01010 1 755 Subtilisin-like Serine Gene Family AT5G67360 41.131 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01010 - - gmx:100779169 1238.02