Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01005 ATGCATTTTTCAGCTTCTGTTCCCATCTTTCACAGAGACATCAAACCCACCAACATACTCCTAGACAGTAACTACAGTGCCAAAGTGTCTGATTTTGGAACATCAAGATCAGTTCCACAAGATAAGACTCACTTAACCACAGTTGTAGGAGGAACTTTTGGGTACATAGACCCTGAATATTTCCAGTCCAGTCAATTTACAGATAGGAGTGATGTATACAGTTTCGGGGTTGTCCTTGTTGAGCTTATAACTGGGAGAAAGCCCAATTCATTCTTAGAGGAAGATGAGGGTCAGAATCTGATTGCAGAATTCATTTCTTTGATGAAGGAGAACCGACTTTCTCAAAATTTAGATGCAAGAGTGGTTAAGGAAGCAAGGATGGATGACATTCTTGCCATTGCAAATCTTGCAATGAGATGCTTGAGACTTAATGGGAAGAAAAGGCCAACAATGAAAGAGGTTTCGGCGGAATTAGAAGCATTGAGAAAGGTACAAAGTTCCTTACAAATCAACCATGATCATGAGTTACCAAGTGGACAATCATTTAAGCACACAACTACTGACATTGACCAAGAATCCACAGAGGAAAGCTTTCTGCTATCCCTACAAATGGAGTCCACATCCTTTTAA 630 0.4016 MHFSASVPIFHRDIKPTNILLDSNYSAKVSDFGTSRSVPQDKTHLTTVVGGTFGYIDPEYFQSSQFTDRSDVYSFGVVLVELITGRKPNSFLEEDEGQNLIAEFISLMKENRLSQNLDARVVKEARMDDILAIANLAMRCLRLNGKKRPTMKEVSAELEALRKVQSSLQINHDHELPSGQSFKHTTTDIDQESTEESFLLSLQMESTSF* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01005 209 ProSitePatterns Serine/Threonine protein kinases active-site signature. 9 21 IPR008271 GO:0004672|GO:0006468
Rops8g01005 209 Pfam Protein kinase domain 8 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01005 209 Coils Coil 151 171 - -
Rops8g01005 209 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 169 IPR045274 GO:0007166
Rops8g01005 209 FunFam Wall-associated receptor kinase 2 1 180 - -
Rops8g01005 209 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01005 209 SMART serkin_6 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g01005 209 SUPERFAMILY Protein kinase-like (PK-like) 6 158 IPR011009 -
Rops8g01005 209 Gene3D Transferase(Phosphotransferase) domain 1 1 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01005 Rops-Chr8 21253125 21254202 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01005 1 162 Receptor kinase-like Gene Family AT1G79670 61.111 1.38e-66 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Rops8g01005 Pkinase 4.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01005 - - gmx:100792803 335.88