Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g01000 ATGGCTTCCCATGTTGCTCTTCTTCATGCTCCTCTTTCAATTCCCACTCAACGCTTCCATGCCAAACAGATTTGCATAAATGGACTCAAACCCTCCACCACTTCTTCTTCTTCTTCTTGGTTTCCATGCTCCACAACAACACAAAGAGGATCTTGTTCTTCAGTGATTGCTTGCTCCTCTTCAAATGGCAGAGAGCCAGATTCAGTGGATGAAGGTGTCAAGAGTGTGGAGCGTCGCCGTGAAGAGAAACGAAGAGCTGAATTGTCTGCTAGAATTGCCTCAGGAGAATTCACAGTGAACAAGCAATCTGGTTTACCTTCTAAATTGAAGAAGAGCTTGTTAAAGGTGGGGGCGCCCATTGAGGTTCTGGAGTTTTTATTTGATTGGATTGAAGGGCGTGGTCAGTTTCCCAGAATTCCTGAGGCAAAAGGTTCAGTCAACGCCGTTCGAAATGAGGCCTTCTTCATTCCCTTGTATGAACTTTACCTCACATATGGTGGGATTTTCAGGTTGACGTTTGGACCAAAGTCCTTTTTGATAGTATCTGATCCATCTATTGCAAAACACATATTGAGAGACAATGCAAAGGCTTATTCAAAGGGTATCTTGGCTGAAATCCTAGACTTTGTGATGGGGAAAGGACTCATCCCAGCTGATGGGGAAATATGGCGAGTTAGACGACGTGCTATAGTCCCAGCATTGCATCAGAAGTTTGTAGCAGCTATGATTGGCCTTTTTGGACAAGCTACAGATAGGCTCTGCAAGAAGCTAGATGCTGCTGCATCTGATGGAGAAGATGTCGAGATGGAGTCACTTTTCTCTAGATTGACCTTGGACATCATTGGCAAGGCAGTGTTCAATTATGATTTTGATTGTTTATCAAATGACACTGGTGTTGTTGAGGCTGTTTATACCGTCCTGAGAGAAGCAGAAGATCGAAGTGTTTCTCCGATTCCAGTCTGGGAGATCCCAATATGGAAAGACATATCCCCACGTCAAAGGAAGGTTGCTGCAGCTCTCAAATTGATCAATGATACACTTGATGATCTAATAGCAATATGCAAGAGAATGGTGGATGAAGAAGAGTTGCAGTTTCATGAGGAGTACGTGAATGAACAAGATCCAAGTATTCTGCACTTCTTGTTGGCATCAGGAGATGATGTGTCGAGTAAACAACTCCGTGATGATTTAATGACAATGCTTATTGCTGGACATGAAACATCAGCTGCTGTTTTGACTTGGACCTTTTATCTTCTGTCGAAGGAGCCTAGGGTTGTGTCCAAGCTCCAAGAAGAGGTTGACTCTGTACTTGGAGATCGATTTCCAACAATTGAAGACATGAAGAAACTCAAATATACAACTCGTGTGATCAACGAGTCATTGAGGCTTTACCCACAACCACCTGTGTTAATTCGTCGCTCTCTTGAGGATGATGTTCTTGGAGAGTATCCTATAAAAAGAGGTGAAGATATCTTTATATCTGTCTGGAACCTGCATCGCAGTCCAAAACTGTGGGATGATGCTGATAAGTTCGAACCTGAAAGATGGCCGTTAGATGGACCTAACCCTAATGAGACGAATCAAAACTTCAAATATCTACCATTTGGTGGAGGACAACGGAAATGTATAGGTGATTTGTTTGCTTCATATGAGACAGTAGTAGCACTCGCAATGCTTGTTAGACGATTCAACTTCCAAATGGCGGTTGGAGCTCCACCAGTTGAGATGACTACTGGAGCTACAATTCATACAACACAAGGGTTGAAGATGACTGTAACACGCAGAATAAATCCTCCTATTGTGCCTTCATTACAGAGGTCAACATTGGTAGTGGATCCATCCATGAGCCTTTCTGATAAGGATGAAATAAGTCAGAAAGGTGAAATTTATCAAGCTCAGTCCTGA 1905 0.4294 MASHVALLHAPLSIPTQRFHAKQICINGLKPSTTSSSSSWFPCSTTTQRGSCSSVIACSSSNGREPDSVDEGVKSVERRREEKRRAELSARIASGEFTVNKQSGLPSKLKKSLLKVGAPIEVLEFLFDWIEGRGQFPRIPEAKGSVNAVRNEAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNAKAYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPALHQKFVAAMIGLFGQATDRLCKKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDCLSNDTGVVEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAAALKLINDTLDDLIAICKRMVDEEELQFHEEYVNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPRVVSKLQEEVDSVLGDRFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLEDDVLGEYPIKRGEDIFISVWNLHRSPKLWDDADKFEPERWPLDGPNPNETNQNFKYLPFGGGQRKCIGDLFASYETVVALAMLVRRFNFQMAVGAPPVEMTTGATIHTTQGLKMTVTRRINPPIVPSLQRSTLVVDPSMSLSDKDEISQKGEIYQAQS* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g01000 634 PANTHER CYTOCHROME P450 FAMILY 4 159 595 - -
Rops8g01000 634 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 535 544 IPR017972 GO:0005506|GO:0016705
Rops8g01000 634 CDD CYP97 156 589 - -
Rops8g01000 634 MobiDBLite consensus disorder prediction 59 80 - -
Rops8g01000 634 Gene3D Cytochrome P450 137 601 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01000 634 MobiDBLite consensus disorder prediction 31 50 - -
Rops8g01000 634 PRINTS P450 superfamily signature 533 542 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01000 634 PRINTS P450 superfamily signature 403 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01000 634 PRINTS P450 superfamily signature 542 553 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01000 634 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01000 634 Pfam Cytochrome P450 159 578 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01000 634 FunFam Carotene epsilon-monooxygenase, chloroplastic 140 597 - -
Rops8g01000 634 SUPERFAMILY Cytochrome P450 152 595 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01000 634 PRINTS E-class P450 group I signature 532 542 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01000 634 PRINTS E-class P450 group I signature 412 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01000 634 PRINTS E-class P450 group I signature 162 181 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01000 634 PRINTS E-class P450 group I signature 494 518 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01000 634 PRINTS E-class P450 group I signature 542 565 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01000 634 PRINTS E-class P450 group I signature 454 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g01000 634 PRINTS E-class P450 group I signature 392 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g01000 Rops-Chr8 21218290 21224409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g01000 63 604 Cytochrome P450 AT1G31800 82.936 0.0 925
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g01000 K15747 - gmx:100780770 1089.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01000 8 21218290 21224409 Rops8g01000 8 21218290 21224409 ECH