Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00978 ATGGAAGAAGATAACAACAACAACAATAAAAGTAACAATTGTGATGATGAAATCTTTGTTTCTGATTCCAAAGGTGGAGACTTTCCTGGTTTTCAAGCCAAAAGAAGCATTGCTGAGAGAAGGGGTTTCAATTCCAATGCAGCAAGGATCAACACAGCGCTTTTTCGCACTGCAAATGCAACTTCAACAACAACCCCTTTGGCTTCTCCTGCAGCTAGATCACCTCGTCTCACTATACCACCTGGAATTAGCCCCACTGCATTGCTTGATTCTCCTATCATGCTTCCCAATTCTCAGGCTATTCCATCTCCCACTACTGGGTCTTTCTTCATGATGCCACCTCTCACTAATGAAGGATCAATGCTCAGTTTTGTTACAATTGAACAAGGGAATTTGGATGTGCCCACTTCCTCTGGTGCTGCTGCCTCCTTCAAATTCAGCTCTCATGCTCATTTGGATCCTAATCCTTTACTTGACTACACTGCTTCTCTAAATCAGGTTTCTAGTAATTGCAACATGGTAAATGGAGGATATAGAGACAGCCAACTCCTTGTTCAAGCTCAACCACCATTAGATTTTTCATTCCCGGCAGATTTTCCAAATGGCCATTCTGCACAAAGTGAAGTCCATTCGTACAATGATGTGAAAATGGTAAATGCTGCGATTGTTAAGGCTAATAATGTTGAGATGCCAATGTCTCGTTCTGAGGAAGCTAGTGATGAAAGCACTCTGCCTGAAAATGCTATCCATGGTGAGGATATTGGACAGCAACTTGGTTTAGAAGGAGATCAGAAAGAGACATCTCATGCTACAGGAGTGGTAAGGACCTCGGAGGATGGTTATAATTGGAGGAAATATGGACAAAAACAGGTAAAGGGTAGTGAATATCCCAGGAGCTACTACAAATGTACTCAACCTAATTGTCAGGTCAAGAAAAAGGTGGAACGATCCCATGATGGCCAAATAACTGAAATTATTTACAAGGGTGCTCATAACCATGCAAAACCAAATCTTAGTCGTCGAGCATCAGCACTTTCGACTGATGAGATTTCAGAAATTGCTGAAGCCAGTGAAACCTGTGCTAAAGTTGATTGTGATCCAGTCTGGGGAAATATTCAGTCAGGACTAAAAGATACAAAACATAATTTGGAATGGAAGGCTGATGGTCAGGAAAGGACATCCTCGGCTTCTGTTGTGACTGAGCTTTCAGATCCCATATCAACTAAGAAAGCTAAATCGCTGTGTATGTTTGAATCAGACGACACTCCAGAGCTTTCTTCTACACTTGCTAGTCATGATGGTGATGAAGATGGAGCAACTCAAGCACTAATATCAGTAGAAGATGTTGCTGAAGATGATGAATCAGAGTCGAAAAGAAGGAAGAAGGAGAGCTACTCAGTTGAACCAAATTTGCCTCCAAGGGCTGTTCGTGAACCACGTGTTGTAGTCCAAATTGAGAGTGAAGTGGACATACTTGATGATGGTTATCGCTGGCGGAAGTATGGACAAAAGGTTGTCAAAGGAAATCCAAACCCAAGGAGCTACTACAAATGCACAAGTGCTGGATGTTCTGTAAGGAAACACGTGGAGAGGGCTTCCCACAATCTAAAATTTGTTGTTACTACTTATGAGGGAAAACATAACCATGAAGTGCCTACTGCTAGAACCAACAACCAGATAAGCTCAAGTGATGGTGGTTTACCTTCCAGTGGTGCTAATGGACCAGTGTCTCTTACATTACCCGGGAGTAACAGTATCCCAAAGCCTGAAACTCATCAAACTTTTGCACCTCATTTTGATAGAAAACCTGAATTCAGCAATGAGTTTCTCAGGTCCAATTTGATTGGAAGTTTCAGTAATGATATGAAGTTTGGACCTTCCTCCATGTGCCAAATGAAGTATCCTTCCTTGAATAATACCATGCCTTATAACTCCTATGGACTGAATCCTGACCGTTGTGCTGCTCCTCAAGCTGGATCCATTACATCAATGTTCCCTGATTTTCCAATGCCACCACTACCATTGAATCTTCCCTCATCTGGAAACTTTTCTCTTTCTGGAATTAATTTTAACTGTGTAAAAACAATGAATCCTGTCCAACCTTTCCTTTCAGGGCAGCAGGTGAAGGAGATTGATACAGGGTTCCTGAGGCCTAAACAGGAGCAGAAGGATGATACTATGTATAGCACATGCATACCCCCTCTTGATCATGCAAATGCTTCACTCACTTCATCCTCAACATCATCATCCATTTATCAACGTGTCATTCAAAATTTCCCTTCATAA 2286 0.4186 MEEDNNNNNKSNNCDDEIFVSDSKGGDFPGFQAKRSIAERRGFNSNAARINTALFRTANATSTTTPLASPAARSPRLTIPPGISPTALLDSPIMLPNSQAIPSPTTGSFFMMPPLTNEGSMLSFVTIEQGNLDVPTSSGAAASFKFSSHAHLDPNPLLDYTASLNQVSSNCNMVNGGYRDSQLLVQAQPPLDFSFPADFPNGHSAQSEVHSYNDVKMVNAAIVKANNVEMPMSRSEEASDESTLPENAIHGEDIGQQLGLEGDQKETSHATGVVRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQPNCQVKKKVERSHDGQITEIIYKGAHNHAKPNLSRRASALSTDEISEIAEASETCAKVDCDPVWGNIQSGLKDTKHNLEWKADGQERTSSASVVTELSDPISTKKAKSLCMFESDDTPELSSTLASHDGDEDGATQALISVEDVAEDDESESKRRKKESYSVEPNLPPRAVREPRVVVQIESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHNLKFVVTTYEGKHNHEVPTARTNNQISSSDGGLPSSGANGPVSLTLPGSNSIPKPETHQTFAPHFDRKPEFSNEFLRSNLIGSFSNDMKFGPSSMCQMKYPSLNNTMPYNSYGLNPDRCAAPQAGSITSMFPDFPMPPLPLNLPSSGNFSLSGINFNCVKTMNPVQPFLSGQQVKEIDTGFLRPKQEQKDDTMYSTCIPPLDHANASLTSSSTSSSIYQRVIQNFPS* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00978 761 MobiDBLite consensus disorder prediction 448 472 - -
Rops8g00978 761 MobiDBLite consensus disorder prediction 549 598 - -
Rops8g00978 761 FunFam WRKY transcription factor 33 479 545 - -
Rops8g00978 761 SUPERFAMILY WRKY DNA-binding domain 275 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops8g00978 761 ProSiteProfiles WRKY domain profile. 487 552 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops8g00978 761 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 202 579 IPR044810 GO:0003700
Rops8g00978 761 Gene3D WRKY domain 479 545 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops8g00978 761 MobiDBLite consensus disorder prediction 552 591 - -
Rops8g00978 761 FunFam WRKY transcription factor 264 337 - -
Rops8g00978 761 ProSiteProfiles WRKY domain profile. 272 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops8g00978 761 Gene3D WRKY domain 264 337 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops8g00978 761 Pfam WRKY DNA -binding domain 493 550 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops8g00978 761 Pfam WRKY DNA -binding domain 278 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops8g00978 761 SMART WRKY_cls 277 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops8g00978 761 SMART WRKY_cls 492 551 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops8g00978 761 MobiDBLite consensus disorder prediction 452 467 - -
Rops8g00978 761 SUPERFAMILY WRKY DNA-binding domain 485 552 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00978 Rops-Chr8 20869945 20870262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00978 65 556 WRKY Transcription Factor Family AT4G26640 38.945 4.17e-90 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops8g00978 WRKY 3.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00978 K18835 - gmx:100800211 1076.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00978 8 20869945 20870262 Rops8g00978 8 20869945 20870262 ECH