Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00970 ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCTCACCCCAATTCACCATCTTCACCTTTTGGGAAACGCAAGAACTCCAACAAAAAGAGGCTTGGATCAAGAACCTCTTCCTTTGAATATTGGAGGAATGAGCCTCTCCATAGGATCCCTGGTAGGATCTTCCTCAATGGCTCTAGTCAAGTTGCCTCCTTGTTCACTCAACAAGGCAAGAAGGGTACTAATCAAGATGCCATGATTGTTTGGGAGAACTTTTGTTCTAGAGAAGATACAATTTTCTGTGGAGTTTTTGATGGCCACGGTCCATTTGGTCACATGGTTGCAAAAAGAGTGAGGGATTCTCTTCCTCTAAAACTGAATGCCCACTGGGAACTTAATGTATCTGGTGGGGAAGTCCTCAAGGAGATTAGCATTAATACTGCAGGAAGCATGAACTCAGAAGACACTGCCTTTGTATCTGCTGATGAGGAATCCAGGGTTTCCATTGATGCTGCCGAGGAAACTGAGAAACACCCTGAAATCTTTCAGACACTTAAAGAGTCCTTTTTGAAGGCTTTCAAAGTTATGGATAGAGAACTGAAAATGCACCAAACTATTGATTGCTTCTGTAGTGGGACAACAGCAGTAACTCTGGTTAAGCAGGGTTGTGATCTTGTTATTGGAAATGTTGGTGACTCTAGAGCTGTGCTGGGTACAAGAGATAAAGATGATTCTCTTGTTGCAGTCCAGTTAACTGTGGATCTGAAACCCAATCTTCCTGCTGAAGCAGAGAGAATTCGCAAATGTAAAGGACGAGTTTTTGCTCTTCAGGATGAACCTGAAGTTTCTCGAGTCTGGTTGCCAAACAATGATTCCCCTGGTCTTGCCATGGCAAGGGCATTTGGAGATTTTTGTCTGAAAGATTTTGGTCTGATATCTGTTCCTGAGGTATCATACAGACGTCTCACTGAGAAAGATGAATTTGTTGTCTTAGCAACAGATGGGATTTGGGATGTGCTCTCAAACAAAGAAGTGGTAGACATTGTAGCAGCTGCATCAAAGCGTTCCTCAGCAGCTCGGGCACTAGTTGAGTCAGCAGTTAGAGCTTGGAGATACAAATATCCAACTTCCAAAGTTGATGATTGTGCTGTGGTTTGCCTCTTTCTTGACTCAGACTTGCACAAAATATCTAGTGCTTCCAATGCCAAATCCCAAGAGCAAATCCAACTTAGCAATGGTGATGAGGAAGGTGTTTCTGGCCCTATTGGTCTAGAAAGATCAGGAACTTGCAGGGAAGGCAATAATGATACTTCCCTTGAAGATAACAACAATGTGGAAGAGTTAAAGGAAGAAGAGGAGATATATGCTGAGACAGAAAAAGAATGGTCTGCTCTTGAAGGAGTATCTCGTGTAAACACATTACTAAATCTTCCAAGATTTGTCCCTGACAAAGAAGACAAGGCTGCAGCAGGGATGAGAAAACAACAAAAATGA 1473 0.4311 MGSCFSAESRSPHPNSPSSPFGKRKNSNKKRLGSRTSSFEYWRNEPLHRIPGRIFLNGSSQVASLFTQQGKKGTNQDAMIVWENFCSREDTIFCGVFDGHGPFGHMVAKRVRDSLPLKLNAHWELNVSGGEVLKEISINTAGSMNSEDTAFVSADEESRVSIDAAEETEKHPEIFQTLKESFLKAFKVMDRELKMHQTIDCFCSGTTAVTLVKQGCDLVIGNVGDSRAVLGTRDKDDSLVAVQLTVDLKPNLPAEAERIRKCKGRVFALQDEPEVSRVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEVSYRRLTEKDEFVVLATDGIWDVLSNKEVVDIVAAASKRSSAARALVESAVRAWRYKYPTSKVDDCAVVCLFLDSDLHKISSASNAKSQEQIQLSNGDEEGVSGPIGLERSGTCREGNNDTSLEDNNNVEELKEEEEIYAETEKEWSALEGVSRVNTLLNLPRFVPDKEDKAAAGMRKQQK* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00970 490 CDD PP2Cc 61 382 IPR001932 -
Rops8g00970 490 Gene3D - 57 384 IPR036457 -
Rops8g00970 490 FunFam probable protein phosphatase 2C 33 57 385 - -
Rops8g00970 490 SMART PP2C_4 53 380 IPR001932 -
Rops8g00970 490 MobiDBLite consensus disorder prediction 397 434 - -
Rops8g00970 490 ProSiteProfiles PPM-type phosphatase domain profile. 62 382 IPR001932 -
Rops8g00970 490 Pfam Protein phosphatase 2C 162 361 IPR001932 -
Rops8g00970 490 SUPERFAMILY PP2C-like 55 383 IPR036457 -
Rops8g00970 490 MobiDBLite consensus disorder prediction 1 34 - -
Rops8g00970 490 MobiDBLite consensus disorder prediction 1 23 - -
Rops8g00970 490 PANTHER PROTEIN PHOSPHATASE 34 380 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00970 Rops-Chr8 20778435 20782851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00970 1 477 PP2C-type Phosphatase Gene Family AT3G02750 64.083 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00970 - - gmx:100790373 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00970 8 20778435 20782851 Rops8g00970 8 20778435 20782851 ECH