Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00963 ATGTGTGGGATATTTGCGTATCTGAATTATAACGTGAAAAGAGAGAGAAGATACATCTTACAAGTTCTCTTCAATGGCTTGCGACGGTTAGAATATCGTGGTTACGATTCCGCTGGAATCGCCATCGATTCTTCCAATTCCGATTTAACTTCCTCTCCTCCTCTTGTCTTTCGCCAAGAAGGAAACATCGAATCCCTCGTTAAATCCGTTTACCAAGAAGTAGGTGAAATTGAATTGAACTTGGAGGAATGTTTCTGTACTCACGCTGGAATTGCGCATACGCGTTGGGCTACTCATGGAGAACCTGCTCCGAGGAATAGTCATCCTCAAACTTCCGGTCCTGCAAATGATTTCTTGGTTGTTCATAATGGAGTTATCACTAATTATGAGGTTTTGAAGGCAACGCTGCTCAGACATGGCTTTACCTTTGAATCTGAAACTGATACTGAAGTTATTCCCAAGCTTGCCAAGTTTGTGTATGATAAAGCTAACGAAGCAGCAGGTGGTCAGGTTGTTACCTTCAGTCAAGTTGTTCTGGAAGTTATGAGGCATCTTGAAGGAGCCTATGCCCTTATTTTCAAAAGTCTACATTATCCTAATGAATTGATTGCTTGCAAGCGCGGTAGCCCGCTGCTTCTTGGTGTTAAAGAATTGACAGAAAATAAGGACAATGGCTCAGCATTTGAGGATAACAAATTCCTATCAAAAGATGGACAGCCCAAAGAACTGTTTTTGTCCAGTGATGCCAATGCTGTGGTTGAGCATACAAAGAAAGTGCTAGTTATTGAGGACGGTGAAGTTGTTCATCTCAAGGATGGTGGGGCCTCTATTTTGAAGTTTGAGAATGACAATGGAGAACATGGCGCTTCTCTTTCCAGAGCTTCTTCGGTGCGACGTGCATTATCTGTTCTTGAGATGGAGGTTGAGCAAATAAATAAAGGACATTATGAGCATTATATGCAGAAGGAAATTCATGAGCAACCAGAGTCTCTAACAACCACAATGAGGGGGAGGCTTATATGTCGAGGGTCTAGCAAATCCAAGTCTGTTTTGTTGGGTGGACTGAAGGATCACCTCAAAACCATTAGGCGAAGTAGAAGGATACTTTTCATTGGTTGTGGTACAAGTTATAATGCTGCTTTGGCAGCTAGACCCATCTTGGAAGAACTTACAGGTATTCCTGTTACTATGGAAATTGCAAGCGATCTATTGGATCGGCAGGGACCAATATACCGAGAAGATACAGCTGTTTTTGTTAGTCAATCTGGTGAAACTGCAGACACTTTACTTGCACTGCAATATGCTTTAGACAATGGTGCATTATGTGTTGGGATAACAAACACTGTTGGTAGTGCAATAGCAAGGAATACACATTGTGGTGTTCATATAAATGCTGGTGCTGAGATTGGTGTGGCTAGTACCAAGGCATATACGAGCCAAATAGTAGTGATGGCCATGTTGGCTCTTGCAATAGGAGGTGATACAATTTCCAATCAAGCGAGAAGAGAAGCTATTATAGATGGTCTTTTTGACCTGCCAAATAAAGTCAGAGAGGTGCTGAAGCTTGATCAGGAGATGAAGGAACTAGCAAAGCTATTGATTGCTGAGCAATCTCTTCTTGTCTTTGGGAGAGGATACAACTATGCAACTGCTCTGGAGGGAGCTTTGAAAGTAAAGGAAGTGGCACTTATGCATAGTGAAGGGATACTCGCTGGTGAAATGAAGCATGGCCCTTTGGCATTAGTGGATGAAAATCTTCCAATTGTTGTTATTGCTACACGTGATGCTTGCTTCAGCAAACAGCAGTCTGTTATTCAACAACTTCACGCCCGCAAAGGTCGCCTGATAGTTATGTGTTCAAAAGGGGATGCTGCTTCTGTATGCCCTGGTCAATCTTGTAGGGCAATTGAAGTTCCACAGGTTGAGGACTGTCTTCAACCTGTAATTAATGTAGTTCCACTACAGTTACTGGCTTATCATCTCACTGTACTGAGGGGATTCAATGTCGACCAGCCTCGTAATCTTGCCAAGAGTGTCACGACGCAATGA 2049 0.427 MCGIFAYLNYNVKRERRYILQVLFNGLRRLEYRGYDSAGIAIDSSNSDLTSSPPLVFRQEGNIESLVKSVYQEVGEIELNLEECFCTHAGIAHTRWATHGEPAPRNSHPQTSGPANDFLVVHNGVITNYEVLKATLLRHGFTFESETDTEVIPKLAKFVYDKANEAAGGQVVTFSQVVLEVMRHLEGAYALIFKSLHYPNELIACKRGSPLLLGVKELTENKDNGSAFEDNKFLSKDGQPKELFLSSDANAVVEHTKKVLVIEDGEVVHLKDGGASILKFENDNGEHGASLSRASSVRRALSVLEMEVEQINKGHYEHYMQKEIHEQPESLTTTMRGRLICRGSSKSKSVLLGGLKDHLKTIRRSRRILFIGCGTSYNAALAARPILEELTGIPVTMEIASDLLDRQGPIYREDTAVFVSQSGETADTLLALQYALDNGALCVGITNTVGSAIARNTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISNQARREAIIDGLFDLPNKVREVLKLDQEMKELAKLLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPIVVIATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASVCPGQSCRAIEVPQVEDCLQPVINVVPLQLLAYHLTVLRGFNVDQPRNLAKSVTTQ* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00963 682 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 2 295 - -
Rops8g00963 682 SUPERFAMILY SIS domain 313 681 IPR046348 GO:0097367|GO:1901135
Rops8g00963 682 CDD GFAT 2 270 IPR047084 -
Rops8g00963 682 Pfam SIS domain 533 664 IPR001347 GO:0097367|GO:1901135
Rops8g00963 682 Pfam SIS domain 362 489 IPR001347 GO:0097367|GO:1901135
Rops8g00963 682 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 2 279 IPR029055 -
Rops8g00963 682 CDD SIS_GlmS_GlmD_2 524 680 IPR035490 -
Rops8g00963 682 ProSiteProfiles SIS domain profile. 358 497 IPR001347 GO:0097367|GO:1901135
Rops8g00963 682 CDD SIS_GlmS_GlmD_1 367 492 IPR035466 -
Rops8g00963 682 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 273 IPR017932 -
Rops8g00963 682 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 1 682 - -
Rops8g00963 682 Pfam Glutamine amidotransferase domain 88 194 - -
Rops8g00963 682 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 314 536 - -
Rops8g00963 682 Gene3D - 314 681 - -
Rops8g00963 682 Gene3D - 518 667 - -
Rops8g00963 682 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 293 IPR029055 -
Rops8g00963 682 ProSiteProfiles SIS domain profile. 529 672 IPR001347 GO:0097367|GO:1901135
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00963 21 214 PRT Gene Family AT2G16570 26.768 3.12e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00963 K00820 - gmx:100779312 1243.02