Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00951 ATGGACTGGTTGACTTTTGATGGAGATGTCTTCGAAGTTCGTTTCCTCCAAGGAGTGAATTGTGGAAAGTTTACCAATGGTTGGAAATCATTTCTTGATGCCTGCAATATGGAGGAAAAAAATCAGGTGATTTTGAACTACTATGGAGGATCCTCTTTTACCTTTCATGAAGACGACCAACAAGGTTTCAATGAAGTCCCGATTTCTGCTCATGAAACCAATCTCCAAGAAGTCTCTCATAATTCTCACTCTGATAATGGCGTCATGTTTCCTCAAATTACCTTGACCGATTACAGTACATCAGCAAACCATCTGGTGGAAGGAGGGAGAAGTTGGAAATGTGGTTTATACAGAAACGAATCAAGACCCAGGGAAGCTAGATTGAGTTATGGGTGGAAAGACTTTTGTTTTGATCTTCAATTGAAGCCAGGAGACCACATAAGTTTCAAAGTTCAAGAGAAATGGAAGAATTGTTTTTTCGTTCATATTGACCGTGTTTGA 501 0.3952 MDWLTFDGDVFEVRFLQGVNCGKFTNGWKSFLDACNMEEKNQVILNYYGGSSFTFHEDDQQGFNEVPISAHETNLQEVSHNSHSDNGVMFPQITLTDYSTSANHLVEGGRSWKCGLYRNESRPREARLSYGWKDFCFDLQLKPGDHISFKVQEKWKNCFFVHIDRV* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00951 166 Pfam B3 DNA binding domain 80 161 IPR003340 GO:0003677
Rops8g00951 166 SUPERFAMILY DNA-binding pseudobarrel domain 99 163 IPR015300 -
Rops8g00951 166 ProSiteProfiles B3 DNA-binding domain profile. 92 166 IPR003340 GO:0003677
Rops8g00951 166 Gene3D - 69 166 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00951 Rops-Chr8 20579121 20579885 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Rops8g00951 B3 1.8e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00951 - K01188 cmo:127150606 43.5134