Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00934 ATGGTTCTAAGTAGCAGAATTTTCAGTGCTTGTGTTATTGTTAGTTTCTCTCTGTTGATCAGTAGTGGCATGTTGACCTACGGAACTGATAGTGATATCTTCTGCTTGAAAAGTGTAAAGGCTTCAATTCAAGACCCTTACAATTATTTGCAATCATGGAATTTTAACAACAAAACAGAAGGGTTTATATGCAAGTTTACTGGGGTTGAATGTTGGCATCCTGATGAGAATAGGGTCTTGAATCTCAAACTTTCCAACATGGAACTTAAGGGCCAGTTTCCTCGTGGAATTCAAAATTGTTCAAGCTTAACAGGATTAGATTTTTCAATTAACAGTCTCTCTCAATCCATTCCAGAAGATATATCCACCCTTCTAAAGTACGTGACATCACTTGATCTATCTTCAAATGATTTCACCGGGGAGATCCCTGTGTCCCTTGCAAATTGTACCTATCTGAATAGTATTAAACTTGACCAAAACCAACTCACTGGTCAAATTCCTGCACAAATTGCTCAGCTCTCAAGGCTTAAGTCATTTAGTGTTTCCAATAATCTTTTGACAGGGCAAGTTCCAATCTTTAGAGCAGGTGTAATTTCAGCAGATAGTTATGCAAATAATTCAGGCCTTTGTGGCGGTCCCTTGGAGCCTTGTCAGGCCAAGTCTTCCAAGAGTAACACTGCAGTTATAGCTGGAGCTGCTGTTGGTGGTGTGACTGTTGCAGCATTAGGATTGGGTATTTTCTTGCTCTTCTATGTCCGCCGTGTTTCCTATAAGAAAAAGGAAGAAGATCCCGAAGGAAACAAGTGGGCAAGAAGTCTAAAGGGAACTAAAACAATTAAGGTTTCTCTGTTTGAGAAGTCAATTTCAAAAATGAACTTGAGTGATCTCATGAAGGCTACTAGTAACTTCAGTAAGAGCAATATGATAGGGTCTGGAAGATCAGGAACTTTTTACAAAGCTGTCCTTGATGACGGCACATCACTCATGGTTAAGAGATTGCAGGAATCTCAACACTCAGAGAAAGAATTTCTGTCTGAGATGGCTACCTTAGGGACAGTCAAACATCGTAATCTGGTTCCTCTTTTAGGTTTCTGCCTGGCCAAAAAGGAGAGGCTTTTGGTCTATAAAAATATGCCAAATGGTACCCTCCATGATCAACTACATCCAGCGGATGGTGTGTGCACCATGGAGTGGTCTCTAAGGCTCAAAATTGCAATTGGAGCAGCCAGAGGATTAGCATGGCTTCACCAAAGCTGCAATCCACGTATTATCCACCGAAACATAAGCTCTAAGTGCATCTTGTTGGATGCAGATTTTGAGCCCAAAATTTCTGATTTTGGCCTTGCCAGATTGATGAACCCAATTGATACACATTTGAGTACTTTTGTAAACGGGGAGTTTGGGGATTTTGGTTATGTTGCTCCTGAGTATACAAAAACTTTGGTGGCCACACCTAAAGGGGATGTTTATAGCTTTGGGACTGTGCTTCTTGAGTTGGTGACAGGTGAAAGACCTACCCATGTGGCCAAAGCTCCGGAAACTTTTAAAGGAAATTTGGTAGAATGGATTACACAGCTCTCAAGCAATTCAAAAATCAAAGATGCCATTGATGAATCACTAGTTGGGAAGGGTGTTGATCAAGAGCTTTTCCAATTTCTAAAGGTTGCATGCAACTGTGTTACAGAAACTCCAAAGGAGAGGCCCACTATGTTTGAAGTATACCAGCTTCTAAGAGCCATTGGGAGTAACTATAATTTCTCAATTGAGGATGAGATAATGGTACCTACAGATACTGGTGATGCTGATAACTTTGAAGAACTTATTGTAGCTCGAGAGAGAAATGATTGA 1848 0.4058 MVLSSRIFSACVIVSFSLLISSGMLTYGTDSDIFCLKSVKASIQDPYNYLQSWNFNNKTEGFICKFTGVECWHPDENRVLNLKLSNMELKGQFPRGIQNCSSLTGLDFSINSLSQSIPEDISTLLKYVTSLDLSSNDFTGEIPVSLANCTYLNSIKLDQNQLTGQIPAQIAQLSRLKSFSVSNNLLTGQVPIFRAGVISADSYANNSGLCGGPLEPCQAKSSKSNTAVIAGAAVGGVTVAALGLGIFLLFYVRRVSYKKKEEDPEGNKWARSLKGTKTIKVSLFEKSISKMNLSDLMKATSNFSKSNMIGSGRSGTFYKAVLDDGTSLMVKRLQESQHSEKEFLSEMATLGTVKHRNLVPLLGFCLAKKERLLVYKNMPNGTLHDQLHPADGVCTMEWSLRLKIAIGAARGLAWLHQSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDFGYVAPEYTKTLVATPKGDVYSFGTVLLELVTGERPTHVAKAPETFKGNLVEWITQLSSNSKIKDAIDESLVGKGVDQELFQFLKVACNCVTETPKERPTMFEVYQLLRAIGSNYNFSIEDEIMVPTDTGDADNFEELIVARERND* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00934 615 SUPERFAMILY L domain-like 31 193 - -
Rops8g00934 615 Pfam Leucine rich repeat N-terminal domain 30 72 IPR013210 -
Rops8g00934 615 FunFam Leucine-rich repeat receptor-like protein kinase 378 587 - -
Rops8g00934 615 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 264 377 - -
Rops8g00934 615 Gene3D Transferase(Phosphotransferase) domain 1 378 596 - -
Rops8g00934 615 CDD STKc_IRAK 309 577 - -
Rops8g00934 615 Gene3D Phosphorylase Kinase; domain 1 264 376 - -
Rops8g00934 615 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 79 579 - -
Rops8g00934 615 FunFam Leucine-rich repeat receptor-like protein kinase 29 192 - -
Rops8g00934 615 Gene3D Ribonuclease Inhibitor 30 219 IPR032675 -
Rops8g00934 615 SUPERFAMILY Protein kinase-like (PK-like) 280 577 IPR011009 -
Rops8g00934 615 ProSiteProfiles Protein kinase domain profile. 303 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00934 615 Pfam Protein tyrosine and serine/threonine kinase 306 576 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00934 Rops-Chr8 20242627 20245599 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00934 6 591 Receptor kinase-like Gene Family AT3G28450 46.193 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Rops8g00934 PK_Tyr_Ser-Thr 8.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00934 - - gmx:100801294 1017.3